Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00843 atgaGTGACAAAGGCAGTGAAATGAACTCTACTCTGCTCCATGGGAAGTACGAGCTCGGTCGCCTTCTTGGTCATGGCACTTTTGCCAAGGTCTATCACGCCAGGAATTTGCAGTCGGGGAAAGGTGTAGCCATGAAGGTGGTGGGCAAAGAGAAAGTCATTCAAGTTGGCATGATGGAGCAGATCAAAAGGGAAATTTCTGTGATGAAGATGGTGAAGCACCCCTACATCGTTCAGCTCCATGAAGTCATGGCCAGTAAATCGAAGATCTATATTGCCATGGAGCTCGTTCGAGGTGGTGAGCTCTTCAGCAAAATTGCGAAAGGTCGATTAAAAGAAGATGTTGCCAGAGTCTATTTCCAGCAATTGATTTCTGCCATCGATTTTTGCCACAGCCGCGGCGTTTACCACCGTGACCTCAAGCCGGAGAATTTGCTTCTGGACGAACATGGTAACTTGAAAGTTACTGACTTTGGGTTAAGTACCTTCTCTGAGCACTTGAGGCAAGATGGGCTGTTGCACACAACGTGTGGAACTCCGGCATATGTGGCGCCGGAGGTAATTGGGAAGAAAGGCTATGATGGTGCTAAGGCTGATATCTGGTCCTGTGGGGTCATCCTCTATGTGCTTCTGGCTGGGTTCTTACCATTTCAAGACGACAACTTGATGGCTATGTACAAGAAAATTTACAGGGGTGACTTCAAATGCCCACCTTGGTTCTCCTCTGAAGCTCGCCGACTCATCATCAAGCTTCTCGACCCGAACCCTAATACCCGAATCACCATTTCCAAGATCATGGAATCGTCCTGGTTCAGGAAATCGGTTCCCAAGAGCACGAGGACGAAAGCAGAGCAAGAATTCGAATTCGACTTTGAGGATAATTGCGAGAAATCGAGGCAGCAGCCAACGACAATGAACGCTTTCCACATAATATCTTTATCAGAGGGGTTCGATCTGTCGCCCTTGTTCgaggagaagaagagggaAGAGAAGGAGGAGCTGAGATTCGCGACGACCAGACCAGCAAGCAGCGTGATATCGAAGCTGGAGGAGGTGGCCAAGGCCGTGAAGTTCAACGTAAAGAAGAGCGACAACAAGGTGAGGCTGCAAGGTCAGCAATGCGGGCGGAAGGGGAAGCTGGCAATTGCGGCGGATTTATACGCGGTAACGCCGTCGTTTCTGGTCGTGGAGGTGAAGAAGGACAGCGGTGATACCTTAGAGTACAACCAGTTCTGCAGCAAAGAGCTTCGTCCCGCACTCAAAGACATCCTGTGGACGTCGCCGGCCGAGAATCCGACGCCCGCTTG 1307 0.4943 MSDKGSEMNSTLLHGKYELGRLLGHGTFAKVYHARNLQSGKGVAMKVVGKEKVIQVGMMEQIKREISVMKMVKHPYIVQLHEVMASKSKIYIAMELVRGGELFSKIAKGRLKEDVARVYFQQLISAIDFCHSRGVYHRDLKPENLLLDEHGNLKVTDFGLSTFSEHLRQDGLLHTTCGTPAYVAPEVIGKKGYDGAKADIWSCGVILYVLLAGFLPFQDDNLMAMYKKIYRGDFKCPPWFSSEARRLIIKLLDPNPNTRITISKIMESSWFRKSVPKSTRTKAEQEFEFDFEDNCEKSRQQPTTMNAFHIISLSEGFDLSPLFEEKKREEKEELRFATTRPASSVISKLEEVAKAVKFNVKKSDNKVRLQGQQCGRKGKLAIAADLYAVTPSFLVVEVKKDSGDTLEYNQFCSKELRPALKDILWTSPAENPTPA 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00843 435 Pfam NAF domain 302 362 IPR004041 GO:0007165
Bva06g00843 435 Gene3D Transferase(Phosphotransferase) domain 1 97 277 - -
Bva06g00843 435 Pfam Protein kinase domain 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00843 435 ProSitePatterns Serine/Threonine protein kinases active-site signature. 135 147 IPR008271 GO:0004672|GO:0006468
Bva06g00843 435 Gene3D Kinase associated domain 1, KA1 299 426 - -
Bva06g00843 435 PANTHER - 9 433 - -
Bva06g00843 435 CDD STKc_SnRK3 16 270 - -
Bva06g00843 435 CDD CIPK_C 306 421 - -
Bva06g00843 435 SUPERFAMILY Protein kinase-like (PK-like) 14 289 IPR011009 -
Bva06g00843 435 Gene3D Phosphorylase Kinase; domain 1 9 96 - -
Bva06g00843 435 SMART serkin_6 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00843 435 ProSiteProfiles NAF domain profile. 300 324 IPR018451 GO:0007165
Bva06g00843 435 ProSitePatterns Protein kinases ATP-binding region signature. 23 50 IPR017441 GO:0005524
Bva06g00843 435 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 9 433 - -
Bva06g00843 435 ProSiteProfiles Protein kinase domain profile. 17 271 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00843 Bva-Chr6 7507304 7509494 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00843 2 435 CBL-interacting serine-threonine protein kinases AT4G30960 74.887 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva06g00843 Pkinase 1.2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00843 - K07198 zju:107426850 753.436