Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00840 ATGCTCCGCAAATTGTTCTTTCGCAAGCCACCTGACGGGCTCCTTGAGATCCGTGAGAGAGTTTATGTTTTTGATTGCTGCTTCACCACTGATGCTTGGAAAgaggaaaattataaattctacGTAGATGGGATAATTGGTCAATTTCGAGAGACCATTGCCGATGTTTCCATTATGGTCTTCAATTTCCGTGAGGAAGAAACAGAAAGTCAGATGGTCAACATCTTGTCTGAGTATGGAATTACGATTATGGACTACCCTCGGCATTACGAGGGTTGCCCGGTTCTCAAAATGGAGCTCATCCACCATTTTTTAAGGAAGCAATATAGTGGCGAACAGAGGACCTTGGAAATGGTTTACAGGCAGGCTCCGCGTGAACTTCTGCATCTGTTGACTCCATTAAATCCTATGCCTTCCCAGCAGAGGTATCTTCAGTATATTTCGAGGAGGAATGTGACCATAGATTGGCCTCCATTAGACAGGGCACTCACATTGGACTGCATCATTCTCAGATTTATTCCAAACGTTGACGGGGAAGGTGGGTGTCGTCCAATTTTTCGAATTTATGGACGGGATCCTTTTGATGCAGGTAAAGATCCGAAAATATTGTACTCAACACCAAAGAAGAGCAAAGCTGTCCGAGCCTACAAGCAGGCAGAGTGTGagctaattaaaattgatatcaattGCAATATCCAAGGTGACATTGTGATTGAGTGCATTAACTTGAATGGAGACATGGATCGTGAACGTATGATATTCCGAGTAATGTTCAACACAGCTTTTATTAGGTCTAATATACTGATGCTAAACTGGGatgaaatagatattttatggGACGCTAAAGATCACTTCCCAAAGGATTTCAGAGCAGAGATCCTTTTCTCAGAGATGGATGCAGCTGCTGCTGTTCTTGCGGATGATACCTCATGCTTTGAAGAGAAGGAGGGACTGCCATTggaagcatttgccaaggttCAAGAGATATTTAACTATGTGGACTGGTTGAATCCTAAGGCAGACGTTGCGCTAAATGTACTCCAACAGATAAATGTATCGACTGTCAAAAATGACAAGTTGGATAAAAGTCCTGATCAGCATGTGGAGACTGGCATTGCATTGCCTGAAACAAGTCCTAAAATGCTTCAGGGGAAAAATGAAGCAAATTTGGAAATACGGTCTGTATCCTCAATCAGGCAATCTCCAGATATTGGTAGGGATAAAAAAGGGGATGAACTTGTCAAGATTGATACTACTCAACAATTTGCCGGTAGATACGACATCATCAGGCAAGAGAAGCCCAATGCCTCTGAGAGAAAATCCAATGAATCTGATCTTCCCTCATCTGGTTCTGTGGATACCTCTAATGTTTCACTTTCACCAAGGACACCTTCACCACGGCCTTCCTTGAGTCGTACTTCTAAAGAAGCTCGTGATTCTCCTCCCGACATGCTAGCACCTGCTTATCATCTTTCCCCTTTCAAATCAGAATATCCTGTTAGTGAAGAAACTGAAGCCCAATCACAGGAAAAAAGTCAAACATCCATTTCTAGCTCTACATTTGGGACTCCTTCAGATTCAGTAATTACTTCAACTAAGCCACCTCCTTCACACCCTGTGCCTCCTCCCTCAACACCCCCTCTAAAGAAGATTCTACCTGTTAGAACTGGATCTGCTTCATCCTCTCCACAACCTCCAACTCCACCTAGTCCCCCAACTCCTCCTCTTAAGGAGCATATAACGGTTAGAGCTGAACCTCCTCCAAAGGTGGATCCACATGGTAGAGCTAGAGCTAGAGCTAGAGCCCCTATAACCCCATCACCTCCTTTAAAGGAGGAGCAACATGCTAGAGCTGGAACCCCTCCTCCCCAACCTCTTCCTTTGGAGGAGGAGCGAAATGTTAGAGCTGGACACCCACCAACCCCAGCTCCTTTGAAGGAGGAGCAAAATGTTAAAGCTTCAGCCTTGCCTACTTTACCACCTCCTTTGAAGGAGGAGACACATGTTAGAGTTGTACCCCCTCCTCCACCCCCACCTCCTTCTAAAGAAAGGAATTCTGATAGAGCAAGACCTCCTGCACCCCCACCACCTCCTCATCTTTCATTGAAAGCTACAGGTCCTACTACATTGCCGCCACCGCCACCACCTCCTGTTGCAGCAATTTCCTCGAAGCCCCCTAATCCTTCATTGGAGAATTCGAGTGCTTCTTCAGCTCCAGCCATTCCACCACCTCCAATTGTGTCAAGCACAACTGGAGCTCGATCTAGCTCACCTGCTGGCTCAAACGGACGAATTCTATCACCTATGTTAAGTTCAAAGAACcatcaaaccaaaaaattgaAGCCTTTACATTGGTTGAAGTTATCTAGAGCAGTGTCAGGAAGTCTGTGGGCTGAAGCACAAAAATCTGGCGAAGATtccaaAGCCCCAGATATTGATATGTCAGAGCTTGAGAGTCTCTTCTCAGCAGCAGTCCCAAATTCAGGCCCTCGTAAGAAATCAAACATCCAGGGCTCAGTTGGGccaaaatttgataaagtgCAACTGATTGATCACAGGCGAGCATATAATTGCGAAATCATGCTTTCAAAAGTGAAAGTTCCATTGCATGATTTAATGAGCTCAGTGCTAGCATTGGAAGAGTCAGCACTAGACGTTGATCAGGTTGAGAACCTCATAAAGTTTTGTCCCACAAAAGAGGAGATGGAACTACTCAAGGGTTACActggagaaaaggaaaagttagGGAAATGTGAACAGTTCTTCCTGGAGTTGATGAAAGTACCACGGGTAGAATGCAAGCTGAGAGTTTTCTCATTCAAGATTCAGTTCCACTCTCAGGTTTCTGACCTTAGAAAAAGCCTGAATGTTGTAAATGCTGCTGCAGAAGAGATTAGAAATTCTCTCAAATTGAAGAGAATTATGCAAACGATACTTTCTCTGGGGAATGCTTTGAACCAAGGAACTGTCAGGGGCTCTGCTATTGGATTCAGATTGGATAGCCTTCTTAAACTCACTGAGACACGTGCGCGGAATAACAAGATGACTCTCATGCATTACCTTTGTAAGGTGCTGGCTGACAAACTACCAGAAGTTCTAGACTTCTCTAAGGATATTTCCAATTTAGAGCCTGCATCAAAGATCCAACTGAAGTTCCTTGCAGAGGAGATGCAAGCTATAagcaaaggattagagaaAGTCGTACAGGAACTGTCAACCTCTGAAAATGATGGTCCAATTTCAGAAACTTTTCGCAAGaatttgAAAGAGTTCCTATGTACTGCGGAAGCTGAAGTCCGATCATTGGCTTCAATATATTCTAGCGTGGGTAGGAACGTGGATGCattgattctttattttggtGAAGATCCGTCTCGCTGCCCTTTTGAGCAAGTTACGTCTACTTTGCTCAACTTTACGAGAATGTTCAACAAAGCCCATGAAGAAAACAGCAAGCAGCTTGAgcttgaaatgaagaaagcatCAGAAAGTGAAAGGAAGATTCGTGAATCAGAACGGCTATTACCTAATGCAATCCGGACTGGCAATGTCAATTG 3557 0.4223 MLRKLFFRKPPDGLLEIRERVYVFDCCFTTDAWKEENYKFYVDGIIGQFRETIADVSIMVFNFREEETESQMVNILSEYGITIMDYPRHYEGCPVLKMELIHHFLRKQYSGEQRTLEMVYRQAPRELLHLLTPLNPMPSQQRYLQYISRRNVTIDWPPLDRALTLDCIILRFIPNVDGEGGCRPIFRIYGRDPFDAGKDPKILYSTPKKSKAVRAYKQAECELIKIDINCNIQGDIVIECINLNGDMDRERMIFRVMFNTAFIRSNILMLNWDEIDILWDAKDHFPKDFRAEILFSEMDAAAAVLADDTSCFEEKEGLPLEAFAKVQEIFNYVDWLNPKADVALNVLQQINVSTVKNDKLDKSPDQHVETGIALPETSPKMLQGKNEANLEIRSVSSIRQSPDIGRDKKGDELVKIDTTQQFAGRYDIIRQEKPNASERKSNESDLPSSGSVDTSNVSLSPRTPSPRPSLSRTSKEARDSPPDMLAPAYHLSPFKSEYPVSEETEAQSQEKSQTSISSSTFGTPSDSVITSTKPPPSHPVPPPSTPPLKKILPVRTGSASSSPQPPTPPSPPTPPLKEHITVRAEPPPKVDPHGRARARARAPITPSPPLKEEQHARAGTPPPQPLPLEEERNVRAGHPPTPAPLKEEQNVKASALPTLPPPLKEETHVRVVPPPPPPPPSKERNSDRARPPAPPPPPHLSLKATGPTTLPPPPPPPVAAISSKPPNPSLENSSASSAPAIPPPPIVSSTTGARSSSPAGSNGRILSPMLSSKNHQTKKLKPLHWLKLSRAVSGSLWAEAQKSGEDSKAPDIDMSELESLFSAAVPNSGPRKKSNIQGSVGPKFDKVQLIDHRRAYNCEIMLSKVKVPLHDLMSSVLALEESALDVDQVENLIKFCPTKEEMELLKGYTGEKEKLGKCEQFFLELMKVPRVECKLRVFSFKIQFHSQVSDLRKSLNVVNAAAEEIRNSLKLKRIMQTILSLGNALNQGTVRGSAIGFRLDSLLKLTETRARNNKMTLMHYLCKVLADKLPEVLDFSKDISNLEPASKIQLKFLAEEMQAISKGLEKVVQELSTSENDGPISETFRKNLKEFLCTAEAEVRSLASIYSSVGRNVDALILYFGEDPSRCPFEQVTSTLLNFTRMFNKAHEENSKQLELEMKKASESERKIRESERLLPNAIRTGNVN 1185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00840 1185 Pfam Formin Homology 2 Domain 773 1143 IPR015425 -
Bva06g00840 1185 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 162 298 IPR035892 -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 441 471 - -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 748 776 - -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 425 778 - -
Bva06g00840 1185 PANTHER FORMIN-J 1 1168 - -
Bva06g00840 1185 SMART PTEN_C2_2 158 297 IPR014020 -
Bva06g00840 1185 ProSiteProfiles Formin homology-2 (FH2) domain profile. 770 1169 IPR015425 -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 358 388 - -
Bva06g00840 1185 ProSiteProfiles C2 tensin-type domain profile. 160 298 IPR014020 -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 667 682 - -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 562 576 - -
Bva06g00840 1185 Gene3D Formin, FH2 domain 769 1154 IPR042201 -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 534 549 - -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 690 723 - -
Bva06g00840 1185 Gene3D - 157 301 - -
Bva06g00840 1185 Coils Coil 1144 1174 - -
Bva06g00840 1185 Pfam C2 domain of PTEN tumour-suppressor protein 161 297 IPR014020 -
Bva06g00840 1185 SUPERFAMILY Formin homology 2 domain (FH2 domain) 783 1160 - -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 582 598 - -
Bva06g00840 1185 SMART it6_source 770 1185 IPR015425 -
Bva06g00840 1185 MobiDBLite consensus disorder prediction 501 533 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00840 Bva-Chr6 7482513 7491060 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00840 1 361 Protein tyrosine phosphatase (PTP) family AT5G58160 58.145 7.71e-162 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00840 - - aprc:113848377 1434.08