Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00836 ATGGGCTTTGGAGTATTTGGTTCTATTTTGGTTCTGTCACTCTTCTTCAAGCCTCTGGCCTCTCAGCAGCCAAATACTGATGGGTTTTTCGTGGCCGAATTTTTGAAGAACATGAGTGTAACATATTCCGAGTTCAACTTCTCTGGTTCTGTGTGTTCATTGCAAGGAGTTACCTGTGATGCCGATAAAGAGAATGTTGTTGAGCTGAGGGCTTCTGGTTTGGGCCTCTCTGGCCCTATTCCTGATACAACCATAAGCAAGCTCAGCAAACTTCAAAGTTTGGATCTTAGCTACAACAACATAACTAGCTTGCCTTCAGATTTCTGGAGTTTAAGCTCGCTGAAAAGGCTTAACCTTTCTTCCAATCAGATTTCTGAGTCACTGACAAACAACATTGGGAATTTTGGTCAGCTGGAAGTCATTGACTTCTCCAGCAACAATTTCTCTGGGGAAATCCCTGAAGCTATAAGCTCCCTTACCCGTCTGCAGGTCCTCAACCTCGCTGAGAACATGTTTGAACACAACATACCTTCAGGGATTCTTCAGTGTCAGTCTCTGGTTTCAATTGATCTTTCATCAAATCAGCTAAATGGGTCTCTCCCTGATCGTTTTGGTGCCGTGTTTCCTAAGCTGAAGACCTTGAACCTTGCAGGGAATAATATTTATGGTCGTGACTCAGATTTTTCAGGGATGAAATCCATTACTAGCCTCAATATATCTGGAAATCAGTTTCAGGGTTCTGTCATGGGTGTGTTTCATGAACAGTTGAAGGTCATTGACCTTAGCAGGAACCAATTTCAGGGCCACATTTCTCAGGTACAGTTCAACTCTAGTTACAATTGGTCTAATTTGGTTTATCTGGATTTGTCTGAAAATCGGCTTAGTGGggaaattttccaaaaattgaaTCAAGCCCAGAATCTGAAACACCTTAATCTTGCACACAATAGATTTACCAGACAGAAGTTCCCACAAATTGGAATGCTCTTAGGATTGGAATATATGAACTTGTCCAAAACTAGTCTTGTTGGTCATATTCCTGCTGAAATCTCAGAGTTACTTAATTTGAATACACTCGATATTTCAATGAACCATCTTGTTGGGAGAATTCCATCACTGAGGAACAAAAACCTCCAAGTTCTTGACGTTTCAAACAACAATTTGAGTGGAGAAATCCCTTCATCCATCTTAAAGAAAATCCCACACATGGAGAAATACAACTTCTCTTACAATAACTTTACTCTCTGTGCTTTGGAAATTTCCTCGGGGACccttaaaacaaaattcattgGATCAGTAGACAGCTGCCCAATTGCTGCAAATCCCattcttttcagaaaaaaatccGCCAAACATAGCGGAACTAAGCTTGCTTTGGTATTGACCTTCTCCATGATCTGCCTGCTTGCCGGGCTCTTATTCCTAGCATTTGGTTGCAGAAGGAAAACGAAAATGTGGGCAGTAAAGCAAGCTTCATACAAAGAAGAACAGAATATCTCAGGTCCCTTCTCATTCCAGACTGATTCAACTACCTGGGTGGCTGATGTTAAGCAAGCAACATCAGTCCAAGTAGTAATCTTTGAGAAGCCATTACTGAATATTACATTTGCAGACCTCTTGGCTGCCACTTCGAATTTTGATAGGGGTACCCTTTTGGCTGAAGGTAAATTTGGGCCTGTTTATAGAGGCTTTTTACCTGGTGGCATTCATGTGGCAGTTAAGGTTTTAGTTGTTGGGTCTACATTGACAGATCAAGAAGCTGCAAGAGAGCTTGAGTATCTTGGTCGAATCAAGCACCCAAATCTTGTTCCTTTAACTGGATATTGCATAGCAGGAGATCAGAGGATTGCTATATACGACTACATGGAGAATGGGAACTTGCAGAATTTGCTTTATGACTTGCCACTTGGGCTGCAGAGAACAGATGATTGGAGCACAGACACTTGGGAAGAAGATGATAATAATGGGATTCAAAATGATGGCTCTGAGGCATTATTAACAACTTGGAGATTTCGCCACAAGATTGCGCTTGGCACTGCCAGAGCATTGGCATTTCTGCATCATGGCTGCTCACCGCCAATTATTCATAGGGATGTCAAAGCAAGTAGTGTTTACTTGGATTACAACCTAGAGCCAAGGTTGTCTGATTTTGGGTTGGCCAAGATTTTTGGTAATGGCTTGGATGAGGAGATTGCTCGTGGTTCACCAGGTTATGTCCCACCAGAGTTTTCTACATCAGACTATGATACCCCAACACCAAAATCTGATGTGTACTGCTTTGGAGTTGTTCTGTTTGAGCTAATAACTGGGAAAAAGCCTGTTGGGGATGATTACCCagatgagaaagaagaaaacttggtaacttgggtCAGAGGACTAGTAAGGAAAAACCAAGCTTCAAGAGCCATTGATCCCAAAATTCGTGACACAGGACCAGATCATCAAATGGAAGAGGCCCTTAAAATTGGATATCTGTGCACAGCAGACCTCTCCTCCAAGCGCCCAACCATGCAGCAGATAGTTGGTCTCCTTAAAGACATTGAACCTACGGCTAATTTGTG 2561 0.4104 MGFGVFGSILVLSLFFKPLASQQPNTDGFFVAEFLKNMSVTYSEFNFSGSVCSLQGVTCDADKENVVELRASGLGLSGPIPDTTISKLSKLQSLDLSYNNITSLPSDFWSLSSLKRLNLSSNQISESLTNNIGNFGQLEVIDFSSNNFSGEIPEAISSLTRLQVLNLAENMFEHNIPSGILQCQSLVSIDLSSNQLNGSLPDRFGAVFPKLKTLNLAGNNIYGRDSDFSGMKSITSLNISGNQFQGSVMGVFHEQLKVIDLSRNQFQGHISQVQFNSSYNWSNLVYLDLSENRLSGEIFQKLNQAQNLKHLNLAHNRFTRQKFPQIGMLLGLEYMNLSKTSLVGHIPAEISELLNLNTLDISMNHLVGRIPSLRNKNLQVLDVSNNNLSGEIPSSILKKIPHMEKYNFSYNNFTLCALEISSGTLKTKFIGSVDSCPIAANPILFRKKSAKHSGTKLALVLTFSMICLLAGLLFLAFGCRRKTKMWAVKQASYKEEQNISGPFSFQTDSTTWVADVKQATSVQVVIFEKPLLNITFADLLAATSNFDRGTLLAEGKFGPVYRGFLPGGIHVAVKVLVVGSTLTDQEAARELEYLGRIKHPNLVPLTGYCIAGDQRIAIYDYMENGNLQNLLYDLPLGLQRTDDWSTDTWEEDDNNGIQNDGSEALLTTWRFRHKIALGTARALAFLHHGCSPPIIHRDVKASSVYLDYNLEPRLSDFGLAKIFGNGLDEEIARGSPGYVPPEFSTSDYDTPTPKSDVYCFGVVLFELITGKKPVGDDYPDEKEENLVTWVRGLVRKNQASRAIDPKIRDTGPDHQMEEALKIGYLCTADLSSKRPTMQQIVGLLKDIEPTANL 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00836 853 ProSiteProfiles Leucine-rich repeat profile. 377 399 IPR001611 GO:0005515
Bva06g00836 853 PANTHER CONCANAVALIN A-LIKE LECTIN/GLUCANASE DOMAIN-CONTAINING PROTEIN-RELATED 1 849 - -
Bva06g00836 853 Gene3D Ribonuclease Inhibitor 274 427 IPR032675 -
Bva06g00836 853 SUPERFAMILY L domain-like 47 418 - -
Bva06g00836 853 SUPERFAMILY Protein kinase-like (PK-like) 532 845 IPR011009 -
Bva06g00836 853 Pfam Protein tyrosine and serine/threonine kinase 550 842 IPR001245 GO:0004672|GO:0006468
Bva06g00836 853 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 849 - -
Bva06g00836 853 Gene3D Ribonuclease Inhibitor 178 273 IPR032675 -
Bva06g00836 853 Pfam Leucine Rich Repeat 377 397 IPR001611 GO:0005515
Bva06g00836 853 CDD STKc_IRAK 552 847 - -
Bva06g00836 853 Pfam Leucine rich repeat 80 124 IPR001611 GO:0005515
Bva06g00836 853 Pfam Leucine rich repeat 185 244 IPR001611 GO:0005515
Bva06g00836 853 ProSiteProfiles Protein kinase domain profile. 546 851 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00836 853 Gene3D Phosphorylase Kinase; domain 1 506 621 - -
Bva06g00836 853 Gene3D Transferase(Phosphotransferase) domain 1 622 852 - -
Bva06g00836 853 SMART LRR_typ_2 376 399 IPR003591 -
Bva06g00836 853 SMART LRR_typ_2 111 135 IPR003591 -
Bva06g00836 853 SMART LRR_typ_2 159 183 IPR003591 -
Bva06g00836 853 SMART LRR_typ_2 208 230 IPR003591 -
Bva06g00836 853 SMART LRR_typ_2 88 110 IPR003591 -
Bva06g00836 853 PRINTS Leucine-rich repeat signature 111 124 - -
Bva06g00836 853 PRINTS Leucine-rich repeat signature 91 104 - -
Bva06g00836 853 ProSiteProfiles Leucine-rich repeat profile. 90 111 IPR001611 GO:0005515
Bva06g00836 853 Gene3D Ribonuclease Inhibitor 31 177 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00836 Bva-Chr6 7459086 7462504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00836 76 847 Receptor kinase-like Gene Family AT5G07280 33.132 2.58e-116 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VII-2 Bva06g00836 PK_Tyr_Ser-Thr 1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00836 - - jre:108993021 1345.87