Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00833 ATGGCTGACAAAGAAGAGAGCTCCAACGCTCTCGCGGTTGAAAAaccagagagagaagaaacgGAGGGCGGTGATGAAAATGAAGACGACCGAGAGGAACATAAACGAGATAGTGAAGTGCCGCCTAGCGAGTCGCAGCAGGGCGTGTCACCGAGTTCTAAACCTTCAGGAGAAGCGGAGCCGAAAAATTCTAATTCGGAAACCCTAGCGGCGCCTCCTTCTGCTGTATCCGCGTTGAACCATCAGTGTGCAGATTTGCTGGTCAGCTCTAGTACGCAGACGGAAGGCAAAGCAGAAAGTAAGGAGACAACTAGACCTTCTGATaaggaaaatattacaaaagaaGCAGTCCAGACAGCTCATACGCTGACAGAAAATCAACCTCAGGTGTCAGCCTGTCCAACTTCGTTATCTGAACTTTCACCAACTTCTGTTACAAAATCCTTGTCATCTGCTCTTAGTCCAACTATACCAGATCAAAGACTGTCACCTCAGAAGGTCAATAATGTTGATATGCTGGAAGTGGATAAGAAAAATCCTTCTGGTGGTAAAACCTTATCCGCTGTTTCTATTGCAAGGACTTCTGCATCTGATGGATACAACTGGCGGAAGTATGGTCAGAAACAAGTAAAGAGTCCTACAGGTTCTCGAAGCTATTACAGGTGTACTCATTCAGATTGTTGTGCTAAGAAGATTGAATGCTGTGACCATTCAGGCCATGTGGTAGAGATCGTTTATAAGAGTCAACACAGCCATGATCCACCACGGAAAACTAACTCTGCTAGACAGAGTAAGATCGCAACAGCCAATGAACCTGCTGTAGAAAACAGAGTTCTAGAGCATCCCATCGCAGTACTCAATGGTTCAAATCCTACCCCTCCTTCAAAAGAACCTCCACAAGAAGCACCCTTCAGTGCTGAAAAGAAACGAGAAAACTCATCTGATCTTGGTGAGAATGGTAAAATTAGTTTGAAGGAGGAGCATGTTAATGAGCCAGAACAGAAAAAAAGAATGAAGAGAGGTGACATATCATGCCCAGATTCTCCCGTGAAACCTGGAAAGAAACCAAAGTTTGTTGTGCATGCAGCAGGGGATGTGGGGATATCAGGTGATGGATACCGGTGGCGCAAGTATGGGCAGAAAATGGTGAAGGGAAATCCTCATCCTAGAAACTATTACAGATGCACTTCAGCTGGATGTCCTGTTCGTAAGCACATTGAGACTGCTGTAGATAACACAAATGCCGTCATCATAACATACAAGGGAGTACACGACCATGACATGCCGGTGCCCAAGAAACGACATGGCCCACCAAGTGCTCCTCTTGTGGCTGCTGCTGCGCCTGCTTCGATGAGCAATATGCAGTTGAAGAAAACTGAGTCACTGCAAAACCAGAAATCTCCTACTCAATGGTCCGTGGACACAGAAGGAGAATTAACTGGGGAAGCCCTGGACCTTGGAGGTGAGAAAGCAATGGAGTCAGCTCGAACACTTCTGAGCATCGGTTTTGAAATTAAGCCTTGCTG 1526 0.4515 MADKEESSNALAVEKPEREETEGGDENEDDREEHKRDSEVPPSESQQGVSPSSKPSGEAEPKNSNSETLAAPPSAVSALNHQCADLLVSSSTQTEGKAESKETTRPSDKENITKEAVQTAHTLTENQPQVSACPTSLSELSPTSVTKSLSSALSPTIPDQRLSPQKVNNVDMLEVDKKNPSGGKTLSAVSIARTSASDGYNWRKYGQKQVKSPTGSRSYYRCTHSDCCAKKIECCDHSGHVVEIVYKSQHSHDPPRKTNSARQSKIATANEPAVENRVLEHPIAVLNGSNPTPPSKEPPQEAPFSAEKKRENSSDLGENGKISLKEEHVNEPEQKKRMKRGDISCPDSPVKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIETAVDNTNAVIITYKGVHDHDMPVPKKRHGPPSAPLVAAAAPASMSNMQLKKTESLQNQKSPTQWSVDTEGELTGEALDLGGEKAMESARTLLSIGFEIKPC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00833 508 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 1 506 IPR044810 GO:0003700
Bva06g00833 508 MobiDBLite consensus disorder prediction 98 115 - -
Bva06g00833 508 ProSiteProfiles WRKY domain profile. 364 429 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 SUPERFAMILY WRKY DNA-binding domain 365 429 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 PANTHER WRKY TRANSCRIPTION FACTOR 32-RELATED 1 506 - -
Bva06g00833 508 SUPERFAMILY WRKY DNA-binding domain 193 255 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 MobiDBLite consensus disorder prediction 1 20 - -
Bva06g00833 508 Gene3D WRKY domain 354 430 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 Gene3D WRKY domain 183 256 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 MobiDBLite consensus disorder prediction 248 356 - -
Bva06g00833 508 MobiDBLite consensus disorder prediction 1 141 - -
Bva06g00833 508 Pfam WRKY DNA -binding domain 198 252 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 Pfam WRKY DNA -binding domain 371 426 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 MobiDBLite consensus disorder prediction 83 97 - -
Bva06g00833 508 MobiDBLite consensus disorder prediction 42 75 - -
Bva06g00833 508 ProSiteProfiles WRKY domain profile. 197 255 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 MobiDBLite consensus disorder prediction 116 141 - -
Bva06g00833 508 MobiDBLite consensus disorder prediction 302 344 - -
Bva06g00833 508 SMART WRKY_cls 369 428 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00833 508 SMART WRKY_cls 196 254 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00833 Bva-Chr6 7446056 7451208 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00833 186 508 WRKY Transcription Factor Family AT4G30935 61.656 6.86e-134 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g00833 WRKY 2.2e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00833 - - gmx:100782194 644.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00833 06 7446056 7451208 Bva06g00833 06 7446056 7451208 ECH