Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00823 ATGAAGAGGGTGCAATTAATAATGGCCGGCCATCCCATGATGTTGCTGTGCTCATTATTAATCTTTTCGTTTTCATCATTTGTTGTTCTTTCTGAGTCTGCTGTGCATGTTCCGAAAGAGCAGGAGCTAGATCGAATCTCAGAGCTCCCAGGGCAGCCACGTGTGTCATTTTCACAGTTCTCCGGTTATGTCACTGTCAACGAGCCACATGGCCGAGCACTCTTCTACTGGTTCACTGAAGCCACCACTTCCCCTCACAATAAACCTCTTGTTCTCTGGCTCAATGGAGGGCCGGGTTGCTCATCGGTGGCATATGGAGCATCAGAGGAAATTGGGCCATTCCGGATAAACAAAACTGGCTCTTCACTCTATCTCAACAAATATTCATGGAACAGAGAAGCAAATATCCTCTTTCTTGAATCCCCTGCTGGTGTTGGTTTCTCATACACAAATACAACCTCTGATCTCAAAACATCTGGGGACAAAAGGACAGCTGAGGATGCTCtggtttttttaatcagaTGGTTGTCAAGGTTTCCACAGTATAAATACAGAGAGTTTTACATTGCCGGGGAGAGCTATGCAGGCCATTACGTCCCCCAGTTGGCTAAGAAAATCTATGATTACAACAAAGCAAATCCCCATATCATAAATCTTAAAGGGTTCATTGTGGGAAATGCAGTGACAGATAACTACTACGATGGAATTGGAACTGTGACATATTGGTGGAGCCATTCCATGATATCTGATCATTCATACAGAACTATCATCAAACACTGCGACTTCACAGGAGAAAAGACATCTCAAAAATGTGATGATACTGTGCGTTATGCATTTAACCATGaatttggaaaaattgatCAGTACAGTATTTACACCCCTGCATGTCTAAGCTCGAAGAACAAAACTACACGGCGTTTCATACGGCTCAAGAATACAATTTTGCATATGATTTCTGGGTATGATCCATGTACTGAAAACTATGCAGAGAAATATTTCAATCTTCCTCAAGTGCAGAAAGCAATGCATGCAAATGTCACAAACATTCCTTACAAATGGACTGCTTGCAGTGATGTGCTCCTTAGAAACTGGAACGACTCTGAAGCTTCTGTACTGCATATATACCAGGAGTTAATTACGACTGGTTTGAGAATCTGGGTTTTCAGTGGAGACACAGATTCAGTGGTTCCAGTGACTGCTACAAAGTTTTCCCTCAACCATTTGAATCTTACCACTAAGAATCGTTGGTATCCATGGTACTCAGGCAAACagGTTGGCGGATGGTCAGAGGTGTATGATGGACTCACGTTTGCAACTGTGAGAGGAGCTGGCCATGAAGTGCCATTGTTTCAGCCAAGGCGAGCTTTCATTCTCTTCAGGTCTttcttggcagggaagcagcTACCCAAATCCTG 1415 0.4191 MKRVQLIMAGHPMMLLCSLLIFSFSSFVVLSESAVHVPKEQELDRISELPGQPRVSFSQFSGYVTVNEPHGRALFYWFTEATTSPHNKPLVLWLNGGPGCSSVAYGASEEIGPFRINKTGSSLYLNKYSWNREANILFLESPAGVGFSYTNTTSDLKTSGDKRTAEDALVFLIRWLSRFPQYKYREFYIAGESYAGHYVPQLAKKIYDYNKANPHIINLKGFIVGNAVTDNYYDGIGTVTYWWSHSMISDHSYRTIIKHCDFTGEKTSQKCDDTVRYAFNHEFGKIDQYSIYTPACLSSKNKTTRRFIRLKNTILHMISGYDPCTENYAEKYFNLPQVQKAMHANVTNIPYKWTACSDVLLRNWNDSEASVLHIYQELITTGLRIWVFSGDTDSVVPVTATKFSLNHLNLTTKNRWYPWYSGKQVGGWSEVYDGLTFATVRGAGHEVPLFQPRRAFILFRSFLAGKQLPKS 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00823 471 Gene3D alpha/beta hydrolase 40 298 IPR029058 -
Bva06g00823 471 ProSitePatterns Serine carboxypeptidases, histidine active site. 435 452 IPR033124 GO:0004185
Bva06g00823 471 PANTHER SERINE CARBOXYPEPTIDASE 24 23 470 - -
Bva06g00823 471 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 23 470 IPR001563 GO:0004185|GO:0006508
Bva06g00823 471 Gene3D - 371 465 - -
Bva06g00823 471 Gene3D - 324 361 - -
Bva06g00823 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 435 448 IPR001563 GO:0004185|GO:0006508
Bva06g00823 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 175 200 IPR001563 GO:0004185|GO:0006508
Bva06g00823 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 126 138 IPR001563 GO:0004185|GO:0006508
Bva06g00823 471 PRINTS Carboxypeptidase C serine protease (S10) family signature 139 149 IPR001563 GO:0004185|GO:0006508
Bva06g00823 471 SUPERFAMILY alpha/beta-Hydrolases 44 468 IPR029058 -
Bva06g00823 471 Pfam Serine carboxypeptidase 51 464 IPR001563 GO:0004185|GO:0006508
Bva06g00823 471 ProSitePatterns Serine carboxypeptidases, serine active site. 189 196 IPR018202 GO:0004185
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00823 Bva-Chr6 7391872 7396232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00823 329 468 Calmodulin-binding Proteins AT2G22960 28.369 1.02e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00823 K16297 - gmx:100785391 780.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00823 06 7391872 7396232 Bva06g00823 06 7391872 7396232 ECH