Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00819 ATGCCGACCCGGTGTGAGATCTGCTGCGAGATATTGATCGCCATCTTGCTCCCTCCAGTGGGAGTTTGCTTCAGGCATGGTTGCTGCAGTGTTGAATTCATCATCTGCTTGCTCTTGACTATACTGGGGTATATTCCAGGGATTATTTATGCTCTCTATGCTATTATCTTTGTGGATCGTGACCAGTACTTTGATGAATATAGGCAGCCATTGTATGCCGCATA 224 0.4598 MPTRCEICCEILIAILLPPVGVCFRHGCCSVEFIICLLLTILGYIPGIIYALYAIIFVDRDQYFDEYRQPLYAA 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00819 74 PANTHER BNAA03G50460D PROTEIN 1 74 - -
Bva06g00819 74 PANTHER HYDROPHOBIC PROTEIN RCI2 LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6 -RELATED 1 74 IPR000612 GO:0016021
Bva06g00819 74 ProSitePatterns Uncharacterized protein family UPF0057 signature. 12 27 IPR000612 GO:0016021
Bva06g00819 74 Pfam Proteolipid membrane potential modulator 8 55 IPR000612 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00819 Bva-Chr6 7376688 7377320 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00819 1 74 RCI2 Gene Family AT4G28088 74.324 6.92e-39 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00819 - - twl:120005186 141.354
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00819 06 7376688 7377320 Bva06g00819 06 7376688 7377320 ECH