Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00815 ATGCAGCAAGGTGATCAAACGGTGCTGAGCTTGAGACCTGGTGGCGGTCGTGGCGGCGGTAGGTTCATTGGTCCTCGATTCGATTCGTCATCGTCGACAGCTTCTTCCCCTGCTTTTGGTTCTTTTTCCGCTGATCTTCCTCTCTTGCGTCCCCATGGCGGTGCTTCTGCTCCCTTCTCTATCAAGACTGGAGATTCACGGTTTGAGGGTCGTGAGCGCTTGCGGTACAACAGAGATCAGCTGTTGCAACTCAGAGAGGCTGTTGAGGTCCCTGATGATATTCTAAAAATCAAGAGAGAAATAGAAGCTGAACTTTTTGGTGAAGAATTAAGCTGGGCTCGTGCAGAAGGAAATCCTCCACAGCAATTCCAAAATCGATATTCAGAGCCGGATAACCGTGACTGGCGTGGCCGATCTGGACCGGTTCCTGCTGCAGGAGAAGAGAGGTCTTGGGAAAGCCTACGAGAGAGACAGCAGGATGGTAGTCAGGTTAATCGCCAAGACCAGTTTGCCAGGGCACAGATATCCTCTAACCAAGGGGGAGGACCCACTCCTACTCTAGTTAAGGCTGAGGTGCCATGGTCAGCTAGAAGGGGAAGTCTGTCCGAGAAGGATCGGGTCTTGAAGACTGTAAAAGGGATACTAAATAAGTTGACTCCTGAGAAGTTTGATCTTCTGAAGGGTCAGTTGATTGATGCTGGCATTACGTCAGCTGATATCCTGAAGGGGGTAATTTCACTGATTTTTGATAAGGCCGTGTTGGAACCAACATTTTGCCCCATGTATGCTCTTCTATGTTCTGATCTTGATGAAAAGCTGCCTCCATTCCCATCTGAAGAACCTGGTGGGAAAGAAATCACTTTTAAGCGGGTACTGTTGAATAACTGCCAGGAGGCTTTTGAAGGTGCTGATAAACTCCGGGAAGAAGTGAGGAAGATGACTTCCCCTGAGGAGGAGATGGAGCGTAGGGATAAGGAAAGATTGGTCAAGCTTCGTACTCTTGGCAACATCCGTTTAATTGGTGAGCTGTTAAAGCAGAAGATGGTTCCTGAAAAGATTGTCCATCACATTGTACAGGAGCTTTTAGGACCACCAGATAGCAAGTCCTGTCCTGTAGAGGAAAATGTTGAAGCCATATGTCAGTTTTTCAACACTATTGGTAAGCAGCTCGATGAAAGCCCAAAATCCCAGCGTATAAATGATGTGTACTTCAGCCGATTGAAGGAATTAAGTGCAAACCCCCAACTTGTGTTACGGTTGAGGTTCATGATCAAAGATGTTCTTGATTTGCGGGCTAATAATTGGGTTCCAAGGCGTGAAGAGGTGAAAGCCAAAACCATTACTGAAATTCATTCTGAGGCTGAAAAGAATCTTGGATTACGTCCAGGTGCCACTGCAAGCATTAGAAATCCCCGTGGTATCCTTTCAGGAGGCATTCAAGGAAATGCCAGTCCGGGCTATCCCATGGCACGACCTGGTACTGGGGGTTTGATGCCTGGAATGCCAGGGACAAGGAAGATGCCTGGAATTGATAATGACAACTGGGAGATGCCTAGGGCTCGGTTGATGCCAAGAGGAGACACGGGAGGTGTCCAATCTGCAGGACGTGGTCAGTCTCCTTTACTTGCAAAACCAGCATCAACTCTAAACTCGAAGTTCCTACCTCAAGGTAGCGGTGGTCTTATAAGTGGAAGGAGCAGTGCCCTATTGCATGGAGGTAGTACACCTTCTGCTCGCCCATCGACCTTTGGCTTGGGTTCTGAGCCTGCACCTGCTAAACCTGCTGCTCCCGCTGTGTCCTCTGAGAAGCAGCAAGGTCCAACTCCTCCAAAGTTGAATCTTGATGATCTTCGCCGCAAAACTGTCTCTCTTCTGGAAGAATATTTTAGCGTCCGGATTTTGGATGAGGCATTACAGTGTGTAGATGAACTAAAATCTCCAGCCTACCACCCCGAGGTTGTGAAGGAAGCCGTTTCCCTTGCACTAGATAAAAGTCCACCTTGCGTTGAGCCTGTTGCCAAACTTCTCGAGCATCTCTTTATCAAGAAGATTCTTACAACTAGAGATATAGGAACTGGATGTTTGCTATTTGCTTGTATGCTGGATGACATCGGCATAGATTTACCTAAAGCCCCAAATAACTTTGGTGAGATAATTGGTGAACTGATTTTGGCTGGGGCACTGGATTTTAAGGTGTTAAGAGAGATCCTGACGAAAGTAGAAGATGACCGGTTCCAGAAATCAATATATGATGCTGCGGTACATGTCATTAGCTCTGCATCTGGGCAAGCTGTGTTGGATTCTCAAGCATCTGATGTTGAGGCCTGCCAGAGTCTGTTCAAGTG 2345 0.4751 MQQGDQTVLSLRPGGGRGGGRFIGPRFDSSSSTASSPAFGSFSADLPLLRPHGGASAPFSIKTGDSRFEGRERLRYNRDQLLQLREAVEVPDDILKIKREIEAELFGEELSWARAEGNPPQQFQNRYSEPDNRDWRGRSGPVPAAGEERSWESLRERQQDGSQVNRQDQFARAQISSNQGGGPTPTLVKAEVPWSARRGSLSEKDRVLKTVKGILNKLTPEKFDLLKGQLIDAGITSADILKGVISLIFDKAVLEPTFCPMYALLCSDLDEKLPPFPSEEPGGKEITFKRVLLNNCQEAFEGADKLREEVRKMTSPEEEMERRDKERLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPPDSKSCPVEENVEAICQFFNTIGKQLDESPKSQRINDVYFSRLKELSANPQLVLRLRFMIKDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATASIRNPRGILSGGIQGNASPGYPMARPGTGGLMPGMPGTRKMPGIDNDNWEMPRARLMPRGDTGGVQSAGRGQSPLLAKPASTLNSKFLPQGSGGLISGRSSALLHGGSTPSARPSTFGLGSEPAPAKPAAPAVSSEKQQGPTPPKLNLDDLRRKTVSLLEEYFSVRILDEALQCVDELKSPAYHPEVVKEAVSLALDKSPPCVEPVAKLLEHLFIKKILTTRDIGTGCLLFACMLDDIGIDLPKAPNNFGEIIGELILAGALDFKVLREILTKVEDDRFQKSIYDAAVHVISSASGQAVLDSQASDVEACQSLFK 781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00815 781 SUPERFAMILY ARM repeat 610 766 IPR016024 -
Bva06g00815 781 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 780 - -
Bva06g00815 781 MobiDBLite consensus disorder prediction 519 543 - -
Bva06g00815 781 SUPERFAMILY ARM repeat 202 437 IPR016024 -
Bva06g00815 781 MobiDBLite consensus disorder prediction 113 167 - -
Bva06g00815 781 Gene3D - 609 777 - -
Bva06g00815 781 MobiDBLite consensus disorder prediction 1 38 - -
Bva06g00815 781 Gene3D - 199 435 - -
Bva06g00815 781 MobiDBLite consensus disorder prediction 564 614 - -
Bva06g00815 781 MobiDBLite consensus disorder prediction 564 582 - -
Bva06g00815 781 Pfam MIF4G domain 208 434 IPR003890 GO:0003723|GO:0005515
Bva06g00815 781 ProSiteProfiles MI domain profile. 616 738 IPR003891 -
Bva06g00815 781 SMART ma3_7 617 729 IPR003891 -
Bva06g00815 781 SMART if4_15 208 434 IPR003890 GO:0003723|GO:0005515
Bva06g00815 781 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 780 IPR045208 GO:0003743
Bva06g00815 781 Pfam MA3 domain 617 729 IPR003891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00815 Bva-Chr6 7360758 7366742 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00815 1 779 Eukaryotic Initiation Factors Gene Family AT5G57870 65.747 0.0 962
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00815 K03260 - gmx:100781275 1197.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00815 06 7360758 7366742 Bva06g00815 06 7360758 7366742 ECH