Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00812 ATGGAAGCTGGTAGTGGACTTTTTACGGGGACTCATGATGGCAATGAGCTTGTGGTCATCGAAGGACACGAAGAGCCAAAGCCAGTGAGGAACATAGATGGGCAGCTCTGTGAGATATGTGGTGACACAGTGGGACTTACAGTGGATGGAGATTTATTCGTGGCTTGTGAAGAATGTGGTTTCCCAGTGTGCAGGCCATGCTATGAGTATGAGAGGAGGGAAGGGACCCAAGTTTGCCCTCAGTGCCAGACAAGATACAAGCGTATCAAAGGAAGCCCGAGAGTGGAaggagatgaagatgaagatgatgtGGACGATATCGaacaagaatttaaaatgCTGCAAGGGAAGATGAGTTATGGAGAAGGTGATGAGAATGCTAAATCAACATCACTAGTTACAGCAAAGGTGAATGGTGAGGTGCCAATACCTTCCTATGGTCTTGGAGAATCTGCAAGTGCAAGATGGGACGAAAAGGATAAAGAGAGGATAGATGACTGGAAGTTGAACCAAGGCAATCTGTGGCCTGAAACAGACGCCTCCACGGACCCCGAAAAGGCCAGGAGAGATGAAGCTAGACAGCCACTCTCTAGGAAAGTAGCAATACCATCAGGGAGACTCAGTCCTTACAGAATGATGGTTGTTGCTAGGCTTATCATCACACTACTCTTCATTCAGTATAGAGTGTTGCACCCCGTGCCCGAAGCAATTGGACTCTGGCTAATATCAGTCGCATGCGAAATCTGGCTTGCACTCTCCTGGATGCTTGATCAGCTTCCCAAGTGGTTTCCCACCGACCGTGAGACATACCTTGATCGGCTTTCAATCAGGTTTGAACCGGAGGACAAGCCTAATTTGCTTTCTCCACTAGATGTCTTCGTCACTACTGTGGATCCAATCAAGGAGCCTCCTTTAGTTACTGCCAACACAATTCTTTCAATCTTGGCCATGGATTACCCTGCTGACAAAATCGCATGCTATGTTTCTGATGATGGAGCTTCCATGCTCACATTTGAAGCTCTTCAAGAAACTGCTGAATTTGCACGCAAGTGGGTCCCTTTCTGCAAAAAGTATTCTATAGAGCCTCGAGCACCAGAGAAGTACTTCTCTGAGAAGATTGATTTTCTAAAGGATAAGGTCCAGCCAACATATGTAAAAGAACGCCGAACTATGAAGAGAGAATATGAAGAATTTAAGGTTAGAATAAATGCACTGGTGGCTAGATCCACAAGAGTTCCCCAGGAAGGTTGGACCATGAAAGATGGGACACCATGGCCAGGAAACAATATCAGAGATCATCCTGGTATGATACAAGTCCTTCTTGCTCCGAGTGGAGGCCCTAAATCTGATGCTGCAGGAAATGAGCTTCCCCGTCTTGTCTACGTGTCTCGCGAGAAAAGACCTGGATTTCCACACCACAACAAAGCTGGTGCACTGAATGCCTTGCTTCGCGTATCTGCAGTGCTAAGCAATGCTCCTTATGTGCTGAATTTGGATTGCAATCATTATGTAAATAATAGCAAGGCTGTGAGAGAGGCCATGTGTTTCTTCGTGGACCTGCAAACTGGGAAGACCATTTGCTTTGTCCAATTCCCAATACGATTTGATAGCCTTGATGCACATGATCGTTATGCCAACAGAAACACAGTTTTATTTGAcATTAAACTGAGGTGTGAAGACGGAATTCAGGGCCCTGCTTATGTTGGTTCAGCTTGTATCTTCAGAAGGAAAGCTTTATATGGCTGTGATCCTCCTAAGGTTGCAAAGCGCCCAAAAATGGAAGGCTGCGACTGCTGTCCCTGTTTTGGAGCCCGCAAGAAGCTACAAGTGCATTCTAAGCATGATGGAAATGGAGATGAAGCAAGCATAACAGaaggaacaGATGAAAACAAGCAAGAATTACTGTCAGAGATAAATTCTGAAGATAAATTTGGGAAGTCTGAAATCTTTGTGAACTCTACCTTAAACGAACAAGGTGGAATTCCTTCATCCTCCACTCTGGCAGCTCTGCTTAAAGAAGCCATTCATGTTATGAGTAGTAGCTATGAGGACAGAACTCCCTGGGGAAAGGAGCTAGGTTGGAGCTATGGATCTGTAGCATCAGAGGCTCTAACAGGTTTTAAGATGCATTGTCGTGGTTGGAGATCTATATACTGTATGCCAAAGAGATCTCCATTCAGGGGCACGGCTCCTATCAACCTTACAGATCGACTAAACCAGGTGCTTAGATGGGCAGTAGGATCAATGGAGATCCTTTTCAGCCGCCATTGCCCATTATTGTATGGTTTGAAAGACGGAAGACTCAAGGGGCTTCAAAGGGTTTCCTATATCAGCAGCACTGTCTATCCCTTCAGCTCAATACCCCTCCTAGTATACTGCCTCCTTCCTGCTGTCTGCTTGCTCACTGGGAAATTCATCACACCATCGGTAAGCACTTATGCAAGCCTCCTCTTCATTGGTCTGTTCATAACAATCTTTGCTACGGGTATTCTTGAGTTGAGATGGAGTGGAGTTAGCCTAGAGGAATGGTGGAGAACCGAGCAATTCTGGGTCATCAGCAGTGTTTCTGCGCACCTCTTTGCCATTGTGCAAGGCTTTCTGAAGTCTCTGACTAGAGTTGATATGAACTTCATTATCATGTCGAAGGCACCAGATGATGGGGAGTTTCGAGAATTGTATGCCTTTAGATGGACTGCCCTCATTGTACCTCCAACTACTATCATAATCATCAACCTTGTTGGAATAGTAGCAGGAATGACTGATGCCATAAACAGCGGTGAACATTCCTGGGGAATGCTACTTGGGAAgctcttcttttccttctggGTTATTGTCCATCTTTACCCATTCCTTAAAGGTTTAATGGGTAGGCAGAACCGAACGCCAACTCTTATTGTCATATGGTCTGTGCTTTTGGCTTCTATCTTCTCCTTAATTTGGGTCAGAATTGATCCTTTTGTGCTAAAAACAAAGGGACCTGACATCAAGCAATGTGGAATCAGTTGctg 3008 0.4438 MEAGSGLFTGTHDGNELVVIEGHEEPKPVRNIDGQLCEICGDTVGLTVDGDLFVACEECGFPVCRPCYEYERREGTQVCPQCQTRYKRIKGSPRVEGDEDEDDVDDIEQEFKMLQGKMSYGEGDENAKSTSLVTAKVNGEVPIPSYGLGESASARWDEKDKERIDDWKLNQGNLWPETDASTDPEKARRDEARQPLSRKVAIPSGRLSPYRMMVVARLIITLLFIQYRVLHPVPEAIGLWLISVACEIWLALSWMLDQLPKWFPTDRETYLDRLSIRFEPEDKPNLLSPLDVFVTTVDPIKEPPLVTANTILSILAMDYPADKIACYVSDDGASMLTFEALQETAEFARKWVPFCKKYSIEPRAPEKYFSEKIDFLKDKVQPTYVKERRTMKREYEEFKVRINALVARSTRVPQEGWTMKDGTPWPGNNIRDHPGMIQVLLAPSGGPKSDAAGNELPRLVYVSREKRPGFPHHNKAGALNALLRVSAVLSNAPYVLNLDCNHYVNNSKAVREAMCFFVDLQTGKTICFVQFPIRFDSLDAHDRYANRNTVLFDIKLRCEDGIQGPAYVGSACIFRRKALYGCDPPKVAKRPKMEGCDCCPCFGARKKLQVHSKHDGNGDEASITEGTDENKQELLSEINSEDKFGKSEIFVNSTLNEQGGIPSSSTLAALLKEAIHVMSSSYEDRTPWGKELGWSYGSVASEALTGFKMHCRGWRSIYCMPKRSPFRGTAPINLTDRLNQVLRWAVGSMEILFSRHCPLLYGLKDGRLKGLQRVSYISSTVYPFSSIPLLVYCLLPAVCLLTGKFITPSVSTYASLLFIGLFITIFATGILELRWSGVSLEEWWRTEQFWVISSVSAHLFAIVQGFLKSLTRVDMNFIIMSKAPDDGEFRELYAFRWTALIVPPTTIIIINLVGIVAGMTDAINSGEHSWGMLLGKLFFSFWVIVHLYPFLKGLMGRQNRTPTLIVIWSVLLASIFSLIWVRIDPFVLKTKGPDIKQCGISC 1002
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00812 1002 Pfam Cellulose synthase 290 996 IPR005150 GO:0016020|GO:0016760|GO:0030244
Bva06g00812 1002 ProSiteProfiles Zinc finger RING-type profile. 37 83 IPR001841 -
Bva06g00812 1002 SUPERFAMILY RING/U-box 21 105 - -
Bva06g00812 1002 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 447 584 IPR029044 -
Bva06g00812 1002 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 19 110 IPR013083 -
Bva06g00812 1002 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 1 1002 - -
Bva06g00812 1002 CDD mRING-HC-C4C4_CesA_plant 35 85 - -
Bva06g00812 1002 Pfam Zinc-binding RING-finger 27 104 IPR027934 -
Bva06g00812 1002 Coils Coil 388 408 - -
Bva06g00812 1002 MobiDBLite consensus disorder prediction 181 195 - -
Bva06g00812 1002 SUPERFAMILY Nucleotide-diphospho-sugar transferases 302 800 IPR029044 -
Bva06g00812 1002 MobiDBLite consensus disorder prediction 172 195 - -
Bva06g00812 1002 PANTHER CELLULOSE SYNTHASE 1 1002 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00812 Bva-Chr6 7343176 7347624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00812 1 1002 Cell Wall Biosynthesis AT5G17420 66.764 0.0 1453
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00812 K10999 - gmx:100777270 1585.08