Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00809 ATGGATATGTACATTCGTGTTAAGCGTAGTAAGACTACATACTTTATCCGGTGCAAGCCATCTGATAAAATTCTTGACATAAAGCAGAAGTTGGAAGATCTCATTGATCAACCAGTTAACAATCAGCGGTTAATTCTACCTGGTACTGGAGAAGTATTAGAGGACTCAAAGACACTGGCAGATCAAAAGGTTGAAAACGATGCAGTTGTTGCACTGACATTGAGAAAAGATGATAATGAATTTGAGGAGATCAACATTGTTCGGCCAAATGATTTCTGCCATTCGCGGGATGCAGATGGTGCCAATTGGTA 311 0.3987 MDMYIRVKRSKTTYFIRCKPSDKILDIKQKLEDLIDQPVNNQRLILPGTGEVLEDSKTLADQKVENDAVVALTLRKDDNEFEEINIVRPNDFCHSRDADGANW 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00809 103 ProSiteProfiles Ubiquitin domain profile. 1 79 IPR000626 GO:0005515
Bva06g00809 103 SMART ubq_7 3 75 IPR000626 GO:0005515
Bva06g00809 103 Gene3D - 1 92 - -
Bva06g00809 103 SUPERFAMILY Ubiquitin-like 1 79 IPR029071 -
Bva06g00809 103 PANTHER OS03G0364000 PROTEIN 1 100 - -
Bva06g00809 103 Pfam Ubiquitin family 5 76 IPR000626 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00809 Bva-Chr6 7324451 7327514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00809 1 75 Cytoplasmic Ribosomal Protein Gene Family AT1G23410 33.333 1.91e-06 42.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00809 K03873 - gmx:100499885 194.512