Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00805 ATGTCAGGGATTGTTTCAGACCCCAAAAACTCTCTCGCTAGCTGGAAATCTCCGAGTGTTCGTGTCTGTAATTGGTCTGGCGTCAGATGCAACAATGCAAGTGACAGAGTGGTTGAGCTTGACCTAAGTGGAAAGTCACTTGGAGGCACCATTTCCCCTGCTCTTGCTGACCTCTCTTACTTGAAAATTATAGATTTATCtgagaatttttttgtgggtCACATTCCAAAAGAATTGGGCTATTTAGTTCAGCTTGGAGAGCTCAGTTTATCTGGGAATTTTCTTGAAGGGAAAATTCCCTCTGAATTTGGTTCACTTCACGGATTATATTACCTTGATCTGGGAAGTAACCAGCTTGAGGGTGAGATTCCACCATCACTTTTCTGCAATGGGTCTTCGTCACTGAAGTACATTGATCTCTCTAACAATTCTTTAGGGGGCCAAATCCCCTTGAGCAATCAATGCATGCTTAAAGAGCTTAGGTTCTTTTTGCTTTGGTCTAACCATTTTGTAGGCCAAGTCCCTTTAGCTCTTTCAAACTCCACACAACTTAAATGGCTCGATTTGGAGTTAAACAAGTTTAGTGGAGAGTTGCCATCTGAGATTTTACATGATTGGCCACAATTACAATTCCTCTACTTATCCTATAATGATTTTGTTAGCCATGATGGTAACACCAACCTTGAACCTTTCTTTGCTTCCATGGTGAATTTATCTCACCTTCAAGAACTTGAATTGGCGGGAAACAACCTTGGTGGGAAGCTACCTCGTATTATTGGTGATCTTTCTTCCAACCTCGTACAGCTTCATCTAGATGACAATCTAATATATGGCTCCATTCCTCCAAACATTGCCAACTTCgtcaatttaacttttttaaatttgtccaGCAACCTACTAAATGGATCAATCCCTCCAAGCCTATGCAAGATGGGTAAGCTTGAGAGAATTTTCTTGTCAAATAATTCACTATCTGGTGAGATTCCTTTAGCCCTTGGTGACATTAAGCATCTGGGTCTCCTAGATTTGTCAAGAAACAAGCTTTCTGGTTCGATACCAGATAGTTTTGCCAATCTTTCCCAGTTAAGGAGGCTTTTGCTTTATGAAAACCAGCTTTCAGGAACAATACCACCTAGTCTAGGAAAATGTATCAATTTGGAGATTTTAGACCTTTCCCACAACAGAATTTCAGGGGAGATTCCTTCAGAAGTTGCAGCCTTGTCTAGCTTGAAAATATACTTGAATTTATCAAGCAATAACTTAATTGGGCCATTGCCATTAGAGCTCAGTAAAATGGACATGGTCTTAGCAATTGATCTCTCTACGAACAATCTCTCTGGCACTATCCCACCACAACTTGAAAGCTGCATAGCACTGGAGTACCTCAACCTCTCTGGTAATACATTAGAAGGCCCACTACCATTCTCATTAGGCCAAATGCCATATGTCCGAGCACTCGACTTGTCTTCAAATAGATTATCTGGTAATATACCAGAGTCCTTGCAGGATTCTTCAACTCTCAAGGTACTTAATATCTCTTTCAACAGATTCTCTGGGCATGTATCAAATAAGGGAGTGTTTTCATCACTGACCATGGACTCTTTCCTTGGAAATGATGGTCTCTGTGGCTCAGTAAAAGGCTTGCCAAGCTGCCACAAGAAACATGGATATCATTTGGTTCTCCTATTCATTCCAGTTTTGCTATTTTTCACCCCCTTGTTGTTCATATTATGGTACCCCGTGGTTCTCAAGGTAAAAGCGCGAAGGCAGCTGGAAATTTTTAGTAGAGGGGATTTCGAGGATGATGAAGAGGAAACAAAAGAGCTCAAGTACCCAAGAATTTCATATAGTGAACTTACTGAAGCCACTGGAGGGCTCAATGCTTCAAGATTAATCGGTTCAGGCCGGTTTGGGCATGTCTACAAGGGAGTCCTCCGTGATAATACAAGAATAGCTGTGAAGGTTTTAGATACAACAACAGCTGCTGAACTATCAGGGAGCTTCAGAAGAGAATGTCAAATCCTTAGAAGGATCAGGCACCGAAATTTAATAAGGATTATCACAATTTGCAGCAAGCCCAAGTTTAAGGCCCTTGTTCTTCCGCTTATGCCAAATGGGAGCCTTGAGAAGCACCTTTACCCGAGCCATAGGTTGGATTTGGTTCAGTTAGTGAGGATATGCAGTGATGTTGCCGAGGGAATGGCCTATCTTCACCATTACTCTCCAGTTAGAGTTGTGCATTGTGATCTTAAGCCTAGCAATATACTTCTTGATGATGATATGACAGCTTTGGTGACAGATTTTGGAATTTCAAGACTTGTAAGAGGTGATGAAAATATGTTAACCAATGACTCTGAATTAAATTTCAGTTCAACAAATGGCTTGTTATGTGGCTCTGTTGGCTACATAGCCCCTGAGTATGGAATGGGAAAACAAGCATCAACTCAAGGTGatgtttttagttttggaGTGCTTCTGTTAGAAATTGTGACTGGTAGGCCTCCCACAGATGTCCTTATCCATGAAGGTTCTAGCTTGCATGAGTGGATTAAGAGACAATATCCATATAAGCTTGACAACATTGTTGAACAAGCATTGAGAAAGTGCTCTCCTTCTGCACTGCCAAAACACTATAACAAAATTTGGGAAGATGTTATATTGGAACTCATAGAACTGGGGCTTTTGTGCACACAGCAGAATCCTGCAATGAGACCAAGCATGGTGGATGTTGCCAAAGAGATGGGGAAGTTGAAGGAATTCCTCTCTAATCCATTTGAAGAAAACGATCCCAATGATAATTCTTTCTCTAGTAAAGATAACTTGGTTGTGAAGTA 2834 0.404 MSGIVSDPKNSLASWKSPSVRVCNWSGVRCNNASDRVVELDLSGKSLGGTISPALADLSYLKIIDLSENFFVGHIPKELGYLVQLGELSLSGNFLEGKIPSEFGSLHGLYYLDLGSNQLEGEIPPSLFCNGSSSLKYIDLSNNSLGGQIPLSNQCMLKELRFFLLWSNHFVGQVPLALSNSTQLKWLDLELNKFSGELPSEILHDWPQLQFLYLSYNDFVSHDGNTNLEPFFASMVNLSHLQELELAGNNLGGKLPRIIGDLSSNLVQLHLDDNLIYGSIPPNIANFVNLTFLNLSSNLLNGSIPPSLCKMGKLERIFLSNNSLSGEIPLALGDIKHLGLLDLSRNKLSGSIPDSFANLSQLRRLLLYENQLSGTIPPSLGKCINLEILDLSHNRISGEIPSEVAALSSLKIYLNLSSNNLIGPLPLELSKMDMVLAIDLSTNNLSGTIPPQLESCIALEYLNLSGNTLEGPLPFSLGQMPYVRALDLSSNRLSGNIPESLQDSSTLKVLNISFNRFSGHVSNKGVFSSLTMDSFLGNDGLCGSVKGLPSCHKKHGYHLVLLFIPVLLFFTPLLFILWYPVVLKVKARRQLEIFSRGDFEDDEEETKELKYPRISYSELTEATGGLNASRLIGSGRFGHVYKGVLRDNTRIAVKVLDTTTAAELSGSFRRECQILRRIRHRNLIRIITICSKPKFKALVLPLMPNGSLEKHLYPSHRLDLVQLVRICSDVAEGMAYLHHYSPVRVVHCDLKPSNILLDDDMTALVTDFGISRLVRGDENMLTNDSELNFSSTNGLLCGSVGYIAPEYGMGKQASTQGDVFSFGVLLLEIVTGRPPTDVLIHEGSSLHEWIKRQYPYKLDNIVEQALRKCSPSALPKHYNKIWEDVILELIELGLLCTQQNPAMRPSMVDVAKEMGKLKEFLSNPFEENDPNDNSFSSKDNLVVK 944
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00805 944 Gene3D Transferase(Phosphotransferase) domain 1 703 940 - -
Bva06g00805 944 Pfam Protein kinase domain 629 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00805 944 SMART serkin_6 626 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00805 944 PANTHER OS04G0122200 PROTEIN 1 918 - -
Bva06g00805 944 ProSitePatterns Protein kinases ATP-binding region signature. 632 654 IPR017441 GO:0005524
Bva06g00805 944 MobiDBLite consensus disorder prediction 922 944 - -
Bva06g00805 944 SUPERFAMILY L domain-like 293 543 - -
Bva06g00805 944 SUPERFAMILY L domain-like 3 221 - -
Bva06g00805 944 ProSiteProfiles Leucine-rich repeat profile. 385 407 IPR001611 GO:0005515
Bva06g00805 944 MobiDBLite consensus disorder prediction 926 944 - -
Bva06g00805 944 Gene3D Phosphorylase Kinase; domain 1 597 701 - -
Bva06g00805 944 CDD STKc_IRAK 632 917 - -
Bva06g00805 944 Gene3D Ribonuclease Inhibitor 221 558 IPR032675 -
Bva06g00805 944 PANTHER LEUCINE-RICH RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN 1 918 - -
Bva06g00805 944 Pfam Leucine rich repeat N-terminal domain 3 31 IPR013210 -
Bva06g00805 944 Pfam Leucine Rich repeat 382 399 IPR001611 GO:0005515
Bva06g00805 944 Pfam Leucine Rich repeat 238 253 IPR001611 GO:0005515
Bva06g00805 944 SUPERFAMILY Protein kinase-like (PK-like) 607 912 IPR011009 -
Bva06g00805 944 SMART LRR_typ_2 106 130 IPR003591 -
Bva06g00805 944 SMART LRR_typ_2 384 407 IPR003591 -
Bva06g00805 944 SMART LRR_typ_2 82 105 IPR003591 -
Bva06g00805 944 SMART LRR_typ_2 359 383 IPR003591 -
Bva06g00805 944 SMART LRR_typ_2 335 358 IPR003591 -
Bva06g00805 944 SMART LRR_typ_2 287 311 IPR003591 -
Bva06g00805 944 SMART LRR_typ_2 238 262 IPR003591 -
Bva06g00805 944 ProSitePatterns Serine/Threonine protein kinases active-site signature. 745 757 IPR008271 GO:0004672|GO:0006468
Bva06g00805 944 Gene3D Ribonuclease Inhibitor 154 220 IPR032675 -
Bva06g00805 944 ProSiteProfiles Protein kinase domain profile. 626 921 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00805 944 SUPERFAMILY RNI-like 225 329 - -
Bva06g00805 944 Gene3D Ribonuclease Inhibitor 2 153 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00805 Bva-Chr6 7308689 7311624 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00805 2 919 Receptor kinase-like Gene Family AT3G47570 35.000 9.74e-163 501
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Bva06g00805 Pkinase 2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00805 - - lang:109346572 1400.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00805 06 7308689 7311624 Bva06g00805 06 7308689 7311624 ECH