Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00770 ATGGatttatttttgagAATGCGAAATCCCATCTCACTGAAGCAAGAATTTCTGCGGAAATGGATAATGGGTCTTCGAAAATGTGCCTCTTCGAAAAAGAACATGAACGTGGTTGAGAGAAAGAAGGTCATAAAGCTTTCTGCAGATTTAGCCATGGCTTCTACAAGAAACGAAACTACTCGTTGGAGCCAAGCCCTCATTTTCAGTGCTTCCCAGGACGATGATAACAAAGTCCTCGCAGAGCAGATTTTAGGCTCTACACAGTGCCAAAGCTTAACGAAAGCTGAAACTTGTTCGTCGACACTGCTATGCAACAGCAACAGAAGGATTAGAAGCAGAAAGATCTTGAAAAGAAGCCATAGAATCCACAGAGTGAAGAAAAGTGTGGCTGAGGCTGATTCTATTGCAAAGAGGTTAGTCCAGAAGAGAACACGAATGCTCAAGAGTCTTGTTCCAGGGGGAGAATTCATGGATGATGTGTCTCTGATTGAAGAAACCCTAGATTACATGCAATCCCTGCGAGCTCAGGTTGAAGTAATGCGGTGTCTTCTAACCGCTTCCGAGCTCACCAAtcgtaaatataaata 587 0.4225 MDLFLRMRNPISLKQEFLRKWIMGLRKCASSKKNMNVVERKKVIKLSADLAMASTRNETTRWSQALIFSASQDDDNKVLAEQILGSTQCQSLTKAETCSSTLLCNSNRRIRSRKILKRSHRIHRVKKSVAEADSIAKRLVQKRTRMLKSLVPGGEFMDDVSLIEETLDYMQSLRAQVEVMRCLLTASELTNRKYK 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00770 195 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 186 IPR044660 GO:0006355
Bva06g00770 195 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 12 186 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00770 Bva-Chr6 7122641 7123949 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00770 12 188 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G30410 45.556 7.73e-36 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00770 - - qsu:112033808 207.608
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00770 06 7122641 7123949 Bva06g00770 06 7122641 7123949 ECH