Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00764 ATGGGCAGAATTTTTCTCCAAGTTAAAGGAAATGCCTCTCAGCATTCCTTAGAGCAACCaccatattttcttcttcagccAAACCCACCTTCATCTCCGTCCTTTCGATCTGATGGGTTCAATTTAAACGACAAGGTGAGCCCCAGTATACTGCTCATCATTATAATCATGGCCAttgttttcttcgtttctggTTTGCTTCATCTCCTTGTTAGATTCTTATGGAGACCTTCTAGTAGAGAGGCAGATGATTTAGATAACGTGACTGCTCTTCAAGGGCAATTGCAGCAACTCTTCCACCTCCATGATGCTGGGGTTGACCAGTCCTTCATAGACACCCTCCCTGTCTTCAATTACAAAGCCATTATAGGATTAAAGAACCCATTTGATTGTGCTGTTTGTTTGTGTGAATTCGAGCCTGAAGACACGCTCAGATTGTTACCTAAATGTAGCCATGCCTTCCACATGGAGTGTATAGATACTTGGCTCCTTTCCCACTCTACTTGCCCTCTTTGTAGAGCTAACTTGCTCCCTGATTTCTCATCAAACAATGGCTGTTCCCCTATAGTTCTTGTCCTAGAATCTGGGAGTGAGAGTTCAAGAGAGATTATCCCAGAAAGAGAGGCTGCTATTGAGAGAAGCAGTTCAGTTATAAGAGCAAATTCCCATCTGGGTTGCCGTGGAGACAACGAATTCGGGTCAACCCGTGTCGATTTAGCTCGTAAATCGGGTGATTTGAGTTCAAATGAAAATACTGATCCAATCATAGCGGAGGATTCAATGGAAAAAGTAGTCACGGTGAAGCTGGGGAAGTTCAGGAGTGTAGATGGTGGCGAAAGCAGCAGCAATAACAATGCAGATGCAAGAAGGTGCTTCTCTATGGGGTCCTTTGCTTATATTATGGACGAGAACTCGTCATTGCAGGTACCCATAAGAATCCCTGTGAAAAAGCAGCCAATTAAGAAGCCTGCTTTACCATTAACACCTGGCCGCAGACTTGCAATGTCAGAATGTGACTGTGAATCCAGAAGAGATTTCAAGTTTGCAGCTTTCGATGGAAGTAGAAGCGTCGACGTTTATGGTATTGGGAGTTCTGGTAACGGCAGTGGAGCTGCTATTGGGAGTAGCAGAAAAGAGAGTTTCTCAATTTCCAAGATTTGGCTGAGGGGGAAGAAGGATAAGCCGAATGCAGTGGCTGAAGGATCCAGAAGAACTGTTTCATTTAGGTTCCCTGCTCGGGGAAACGTCGTCTCTACAGATGATTTTAAGAGCAAGAATGAGAAATTTGACACGAGGAGCGCTATTTCTGAAATGGATATTGGCAAGTGGGAAAATGGAGCAAGTGAATACGGCTACGACGAAGAAAATCAGAGCTGTCATAGTATGGATTCTCAGGCAAGAGCACCTTCTTTTGCACGAAGGACTCTGCTTTGGCTTACGGGTAGACAGAACAAGGTTATCCACTCATCCTCTGCATCCAACTCCTA 1487 0.4344 MGRIFLQVKGNASQHSLEQPPYFLLQPNPPSSPSFRSDGFNLNDKVSPSILLIIIIMAIVFFVSGLLHLLVRFLWRPSSREADDLDNVTALQGQLQQLFHLHDAGVDQSFIDTLPVFNYKAIIGLKNPFDCAVCLCEFEPEDTLRLLPKCSHAFHMECIDTWLLSHSTCPLCRANLLPDFSSNNGCSPIVLVLESGSESSREIIPEREAAIERSSSVIRANSHLGCRGDNEFGSTRVDLARKSGDLSSNENTDPIIAEDSMEKVVTVKLGKFRSVDGGESSSNNNADARRCFSMGSFAYIMDENSSLQVPIRIPVKKQPIKKPALPLTPGRRLAMSECDCESRRDFKFAAFDGSRSVDVYGIGSSGNGSGAAIGSSRKESFSISKIWLRGKKDKPNAVAEGSRRTVSFRFPARGNVVSTDDFKSKNEKFDTRSAISEMDIGKWENGASEYGYDEENQSCHSMDSQARAPSFARRTLLWLTGRQNKVIHSSSASNS 495
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00764 495 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 105 178 IPR013083 -
Bva06g00764 495 CDD RING-H2_PA-TM-RING 130 173 - -
Bva06g00764 495 ProSiteProfiles Zinc finger RING-type profile. 131 173 IPR001841 -
Bva06g00764 495 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE-RELATED 19 413 - -
Bva06g00764 495 SMART ring_2 131 172 IPR001841 -
Bva06g00764 495 SUPERFAMILY RING/U-box 110 181 - -
Bva06g00764 495 Pfam Ring finger domain 130 173 IPR001841 -
Bva06g00764 495 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 19 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00764 Bva-Chr6 7090083 7091978 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00764 41 493 C3H Transcription Factor Family AT2G18650 46.526 1.68e-102 311
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00764 - - gmx:100797283 663.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00764 06 7090083 7091978 Bva06g00764 06 7090083 7091978 ECH