Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00763 ATGGCTCCTCCTAACCATCACGATcctcaaattcaatttcaatttcaatctcaatctcaatctCGACCCCTCACCCCGCCGCCAAAACCAAATCCCGACctcctcttcctcctcctcaAATCCATCATCATGATCTTTCTCGCAtccctcttcttcctctttctcggGTTCGCTGCCTTCGTCCTTCTTCACCTCTGCCTCGTCGGCGGTTTCCTCCACCGCCTTCGCCTCCGCCTCCGCCACACCACCCAACTTGAAACTTTGTCAGATAGAATCTCCCCCCGTGATGTAAAGAAGCTTCCCCAGTTTAGGTTTGCCTCTGCTGCCGAATCCGGATCTGATACCCAATGCGTGGTCTGCTTGGATGCCTTCAGGAACGGCCAGTGCTGTAGGAAGCTCATAGCCTGTGGTCACTTGTTTCACAGGAGATGTGTCGATATGTGGTTGATTAAGGTCGCTGCCTGTCCTACGTGCAGGACACCTGTTCGATTGAATGCTTCCATGCTGCATTTCCAAACAGAGGAGAATGATAAGCAGCTTGGGACTTACGGTACGAACAATGCCTTGTGGATTTCGTA 578 0.4533 MAPPNHHDPQIQFQFQSQSQSRPLTPPPKPNPDLLFLLLKSIIMIFLASLFFLFLGFAAFVLLHLCLVGGFLHRLRLRLRHTTQLETLSDRISPRDVKKLPQFRFASAAESGSDTQCVVCLDAFRNGQCCRKLIACGHLFHRRCVDMWLIKVAACPTCRTPVRLNASMLHFQTEENDKQLGTYGTNNALWIS 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00763 192 ProSiteProfiles Zinc finger RING-type profile. 117 159 IPR001841 -
Bva06g00763 192 PANTHER RING-H2 FINGER PROTEIN ATL56 14 180 - -
Bva06g00763 192 SUPERFAMILY RING/U-box 111 165 - -
Bva06g00763 192 Pfam Ring finger domain 116 159 IPR001841 -
Bva06g00763 192 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 92 167 IPR013083 -
Bva06g00763 192 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 14 180 - -
Bva06g00763 192 SMART ring_2 117 158 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00763 Bva-Chr6 7086496 7087657 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00763 29 164 C3H Transcription Factor Family AT2G18670 42.336 2.24e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00763 - - gmx:102664895 145.591