LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva06g00760	ATGCTTTCCCGATCTTGCTTGGACTTATTGAGTTTGGTTTCCACTGATGATTACCGTGCGCTGAGTCGCATACCGAGAGTCATGACGGTCCCCGGAGTTATATCGGAATTTGAAATCGACGACGAGGAGCGTGCCAATTCCGGGTCCGGATCTGATGAGGCTGTTTCATCTGTTTCACAAGAACGCAGAATCATCGTGGCGAACCAGTTGCCCATTCGCGCTTCTCGCGATGCCGACGCCAAGAAATGGAGCTTCGAATTGGACAGTGATAGTTTAGTACTGCAGCTCAAGGATGGGTTCCCCTCTGACGTGGAAGTTTTGTATGTGGGTTCCTTGAAGGCGGAGATCGCTGCTTCAGAACAAGACGAAGTGGCACAAGTCTTGCTGGATAAGTTCCGGTGCGTACCTACTTTCTTACCTGCAGAAATTCAGAATAAGTTCTACCATGGATTCTGCAAGCATTATCTTTGGCCTCTGTGTCACTACATGTTGCCCATGTCGCCCAGTCACGGTGCCCGTTTCGACCGTGCACAGTGGCAGGCTTATGTATTGGCGAACAAGATTTTCGCCGATAAGGTAACGGAGGTGATAAACCCAGATGAGGATTACGTTTGGGTCCATGATTATCATCTTATGATCTTGCCCACTTTTCTGAGGAAACGGTTCCATCGGGTTAAGCTCGGGTTCTTCTTGCATAGCACATTTCCGTCCTCCGAAATCTATAGGACTATACCGGTTCGGGATGATATCCTTCGGGCCTTGTTGAATTGTGATTTAGTCGGATTTCATACTTTTGATTACGCAAGACATTTCTTGTCGTGTTGTAGTAGGATGTTGGGTCTTGATTACGAGTCTAAAAGGGGCTACATTGGCCTAGAATACTATGGTCGAACCGTGACGATTAAGATCTTGCCGGTTGGGATTCACATGGGTCAACTTGAATCCTTCTTGTCCTTATCTCACACCGCTGACAAGATTAAGGAATTGAAGAAACAATTTGAGGGGAAAATTGTCATTTTGGGCGTGGATGACATGGATTTGTTTAAAGGTATTAGCTTGAAGTTCTTAGCAATGGGGCAACTTTTAGAAGTGCACCAGGAGTTAAGAGGTAAAGTGGTTTTAGTTCAGATTCTTAACCCTGCAAGGAGCAGAGGTAAAGATATTCAGGATCTTCAGAACGAGACTAATGACATAGCTAAAGAGATCAACGAAAAATATGGTAAACCAGGCTACCAGCCAATCATCTTCATCAATGGCCCTGTGTCAACACAGGAGAAAGCTGCATATTATGCTATTTCCGAGTGCTGTATAGTGAACGCTGTAAGAGATGGGATGAATTTGGTGCCTTACAAGTACACTGTTTGTAGACAGGGGACCCCTGCTTTGGACAAGGCATTTGGAGTAGACGATGAATCGACAACTCCTAAACAGAGTGTTATTATTGTGTCTGAATTCATCGGATGTTCCCCATCCCTCAGCGGAGCAATCCGGGTGAATCCATGGAACATTGATGATGTCTCTGAGGCCATGAATTCGGCTATCAGAATGCCAGAGGCAGAGAAGCATTTGCGGCATGAGAAGCATTATAAGTACATAAGCTCTCATGATGTTGCTTATTGGGCTAGGAGTTTTGATCAAGATTTAGAAAGAGCTTGTAGAGAGCACTACCTCAAGAGGTGTTGGGGTGTTGGCTTAGGCTTGGGATTCAGAATTGTTGCATTGGATCCTAATTTTAGGAAGCTTTCAGTAGATAACATTGTCTCTGCCTACAAAAGTACACAAAGCAGGTTGATCCTTTTGGACTATGATGGCACTATGATGCCACAGGCTTCGATCAACAAAACTCCAAGCAGTGATGTGATTTATATCTTGAACTGTTTGTGTAGTGATCCCAAAAACATAGTATTCATAGTGAGTGGCAGAGATAAGGAATGCTTAAGCAAGTGGTTTTCTCCATGTCACAACTTGGGTCTCTCTGCGGAGCATGGTTTCGTCACTAGGTTTAGTAGGGATTCCCCTTGGGAGAACTGTGGATTGACGATGGATTTCGATTGGAAAAAGATTGCAGAACCTGTAATGGCGCTTTATACAGAAGCAACCGATGGTTCTTTCATTGAGCAGAAGGAAAGTGCACTGGTGTGGCACCATCAAGAAGCTGACCCTGATTTTGGTTCATGCCAAGCAAAAGAGCTTCTTGATCACCTGGAGAGTGTGCTTGCTAATGAACCAGTTGTGGTTAAGAGAGGACAACATATAGTTGAAGTAAAACCTCAGGGCGTGAGCAAAGGCATTGTTGTGGAAAACCTTATCTCAACGATGCGAAGTCAGGAAAAATCCCCAGATTTTGTGCTATGCATCGGGGATGATCGCTCAGATGAAGACATGTTCGAGAGCATTTCTCGTACAGTTTCTAATCCAAATCTACCAACTATAGCACAAGTGTTTGCATGCACTGTGGGTCAGAAACCAAGCATGGCAAAATACTATCTCGAAGATACCACAGATGTAATCAAGTTGCTTCATGGACTTGCCACTGCATCAGAACAACCAAAGACTGCAGATTTTCTGAGATTGCAAGATTCTCTGTA	2588	0.4455	MLSRSCLDLLSLVSTDDYRALSRIPRVMTVPGVISEFEIDDEERANSGSGSDEAVSSVSQERRIIVANQLPIRASRDADAKKWSFELDSDSLVLQLKDGFPSDVEVLYVGSLKAEIAASEQDEVAQVLLDKFRCVPTFLPAEIQNKFYHGFCKHYLWPLCHYMLPMSPSHGARFDRAQWQAYVLANKIFADKVTEVINPDEDYVWVHDYHLMILPTFLRKRFHRVKLGFFLHSTFPSSEIYRTIPVRDDILRALLNCDLVGFHTFDYARHFLSCCSRMLGLDYESKRGYIGLEYYGRTVTIKILPVGIHMGQLESFLSLSHTADKIKELKKQFEGKIVILGVDDMDLFKGISLKFLAMGQLLEVHQELRGKVVLVQILNPARSRGKDIQDLQNETNDIAKEINEKYGKPGYQPIIFINGPVSTQEKAAYYAISECCIVNAVRDGMNLVPYKYTVCRQGTPALDKAFGVDDESTTPKQSVIIVSEFIGCSPSLSGAIRVNPWNIDDVSEAMNSAIRMPEAEKHLRHEKHYKYISSHDVAYWARSFDQDLERACREHYLKRCWGVGLGLGFRIVALDPNFRKLSVDNIVSAYKSTQSRLILLDYDGTMMPQASINKTPSSDVIYILNCLCSDPKNIVFIVSGRDKECLSKWFSPCHNLGLSAEHGFVTRFSRDSPWENCGLTMDFDWKKIAEPVMALYTEATDGSFIEQKESALVWHHQEADPDFGSCQAKELLDHLESVLANEPVVVKRGQHIVEVKPQGVSKGIVVENLISTMRSQEKSPDFVLCIGDDRSDEDMFESISRTVSNPNLPTIAQVFACTVGQKPSMAKYYLEDTTDVIKLLHGLATASEQPKTADFLRLQDSL	862

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva06g00760	862	PANTHER	ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 11-RELATED	1	851	-	-
	Bva06g00760	862	SUPERFAMILY	HAD-like	596	843	IPR036412	-
	Bva06g00760	862	Gene3D	-	595	711	IPR023214	-
	Bva06g00760	862	Gene3D	-	725	856	IPR023214	-
	Bva06g00760	862	Gene3D	Glycogen Phosphorylase B;	316	533	-	-
	Bva06g00760	862	TIGRFAM	HAD-SF-IIB: HAD hydrolase, family IIB	597	802	IPR006379	-
	Bva06g00760	862	Gene3D	Glycogen Phosphorylase B;	54	315	-	-
	Bva06g00760	862	Pfam	Glycosyltransferase family 20	62	549	IPR001830	GO:0003824\|GO:0005992
	Bva06g00760	862	PANTHER	TREHALOSE-6-PHOSPHATE SYNTHASE	1	851	IPR001830	GO:0003824\|GO:0005992
	Bva06g00760	862	CDD	HAD_TPP	597	838	-	-
	Bva06g00760	862	Pfam	Trehalose-phosphatase	599	833	IPR003337	GO:0003824\|GO:0005992
	Bva06g00760	862	SUPERFAMILY	UDP-Glycosyltransferase/glycogen phosphorylase	62	553	-	-
	Bva06g00760	862	TIGRFAM	T6PP: trehalose-phosphatase	595	844	IPR003337	GO:0003824\|GO:0005992
	Bva06g00760	862	CDD	GT20_TPS	62	549	IPR001830	GO:0003824\|GO:0005992

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva06g00760	Bva-Chr6	7068569	7072014	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva06g00760	1	851	Trehalose Biosynthesis Gene Families	AT2G18700	68.145	0.0	1212

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva06g00760	K16055		-	gmx:100810498	1408.28