Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00759 ATGGAATTAAAAAAGGGAAGGCTTGTCAGgttcTATTCTGATggcaaaaagcaaaaagaaccTCTACGGGGAGGATCTGAACCATCAAAACTTGAGAAGTCGTCATCTCCATACAAGGTTTCGTCATCTTCCTATGCACTCCCGTGGGGGAGAAATAGATTTACTGAAACTTCTAAAATTGGGGGATCTAAGGTATTTCCGGAGGACCATGAGCCATGGCGCAAAAGAATATTGGACCCTGGTAGTGAGATAGTATTAAAATGGAACCGGGTTTTCATAGTTTCATGTTTGGTGGCTCTTTTTGTCGATCCATTGTACTTTTACTTGCCCAGTGTGAGAGGGAATTCTGAGTCTTCATGCGTGAGGACAGACATAACCTTGCGGATTGTTGTGACATTTCTCCGGACCATTGCGGACATCTTTTATCTGTTGCACATGGTGATAAAATTCAGGACAGCATATGTGGCTCCAAGCTCTCGGGTGTTTGGCAGGGGTGAACTTGTTATGAATCCTAAGAAAATTGCAAGGAGATATATCAGATCTGATTTCTTCATTGATTTGATAGCCACATTGCCTCTTCCACAAatgGTTATTTGGTTTATTATACCAGCAACAAGAAGCCCTCAGACAGATCATAAGAATAATGCTCTTGCTTTGATTGTTCTTCTCCAATATATTCCTagattatatttgatatttccaCTGAGTTCTCAAATAATCAAAGCAACAGGAGTGGTTACAAAGACAGCCTGGGCAGGAGCTGCTTATAATCTGTTATTGTATATGTTGGCTAGCCATGTTCTAGGGGCAGCATGGTATGTTCTTTCTGTGGACCGGTATACCTCATGTTGGAAATCCATTTGCAGAAGGGAATCAAGCCCTGAAAAATGCTTTCTTAATTATCTGGATTGTAGTTCTTTAAATCTGGATAAGCGCAGATTATGGGCAAATAGTACAAGTGTATTTAAGAAATGTGATCCTAATACTGAAATTGAATTCAAGTATGGCATATTTGAAAATGCAGTGAAGAAAAGCGTAGTCTACTCAGATTTCATCCCGAAGTACTTATATTGTTTATGGTGGGGACTGCAGCAACTAAGTTCTTATGGGCAGAATTTGGATACAAGCACCTTTATCGAAGAAACGGCATTTGCTATTCTTATTGCCATCATGGGTCTTGTATTATTTGCCCATTTGATTGGGAACATGCAGACATATTTACAGTCAATCACCATACGACTTGAGCAGTGGAGGGTTAAGCGAAGAGACACCGAGGAGTGGATGAGGCATCGGCAACTCCCTGCAGATTTGAAACAACGTGTTCAACGCTTTGTCCAGTATAAGTGGGTTGCAACTCGAGGAGTTGATGAAGAAACCATTCTACAAGGATTACCCACCGATCTTCGCCGGGATATCCAAAGACACCTATGTTTAGACCTTGTCCGGCGAGTTCCCTTCTTCTCCCAGATGGATGATCAGCTACTCGATGCGATATGTGAGCGACTGGTATCCTCTTTGAGCACTCAAGGGACCTACATTGTTCGTGAGGGTGATCCTGTAACAGAAATGCTCTTCATCATCAGAGGAAGACTGGATAGTTCTACTACAAATGGAGGCCGTACTGGTTTCTTTAACTCAATCATATTGAGGCCTGGAGATTTTTGCGGTGAGGAACTGCTTGCATGGGCTTTACTCCCAAAATCAACAGTGAACTTGCCTTCTTCAACTAGGACAGTTAAAGCTCTCAGCGAGGTTGAAGCATTTGCTCTGCGAGCTGAAGACCTCAAATTTGTCGCTAATCAATTTAGGCGCCTCCACAGCAAGAAGCTACAGCACACCTTCCGATTCTATTCCCACCATTGGAGAACTTGGGCAGCTTGCTTCATTCAGGCTGCTTGGCGTAGATATAAGAAAAGGACATCTGCCAAAGATCTCAGCATGAGGGAAGCACTTGCGTTAGATGAGACACAAGCCAATGAGACAGAGCAGGAGGAACATTCTACTGGTTCAAACCCTTCTCAAGCAAAATTGAACCTTGGAGTCACAATACTTGCTTCGAGGTTTGCTGCAAACACAAGAAGAGGAGTTCAGAAGATTAAGGATGACCTGCCAAAGTTACAGAAACCTGAAGAACCTGACTTTTCTACAGAAGTTGATGACTA 2162 0.4186 MELKKGRLVRFYSDGKKQKEPLRGGSEPSKLEKSSSPYKVSSSSYALPWGRNRFTETSKIGGSKVFPEDHEPWRKRILDPGSEIVLKWNRVFIVSCLVALFVDPLYFYLPSVRGNSESSCVRTDITLRIVVTFLRTIADIFYLLHMVIKFRTAYVAPSSRVFGRGELVMNPKKIARRYIRSDFFIDLIATLPLPQMVIWFIIPATRSPQTDHKNNALALIVLLQYIPRLYLIFPLSSQIIKATGVVTKTAWAGAAYNLLLYMLASHVLGAAWYVLSVDRYTSCWKSICRRESSPEKCFLNYLDCSSLNLDKRRLWANSTSVFKKCDPNTEIEFKYGIFENAVKKSVVYSDFIPKYLYCLWWGLQQLSSYGQNLDTSTFIEETAFAILIAIMGLVLFAHLIGNMQTYLQSITIRLEQWRVKRRDTEEWMRHRQLPADLKQRVQRFVQYKWVATRGVDEETILQGLPTDLRRDIQRHLCLDLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTYIVREGDPVTEMLFIIRGRLDSSTTNGGRTGFFNSIILRPGDFCGEELLAWALLPKSTVNLPSSTRTVKALSEVEAFALRAEDLKFVANQFRRLHSKKLQHTFRFYSHHWRTWAACFIQAAWRRYKKRTSAKDLSMREALALDETQANETEQEEHSTGSNPSQAKLNLGVTILASRFAANTRRGVQKIKDDLPKLQKPEEPDFSTEVDD 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00759 720 SUPERFAMILY Voltage-gated potassium channels 82 408 - -
Bva06g00759 720 ProSiteProfiles cAMP/cGMP binding motif profile. 486 616 IPR000595 -
Bva06g00759 720 MobiDBLite consensus disorder prediction 29 43 - -
Bva06g00759 720 MobiDBLite consensus disorder prediction 1 43 - -
Bva06g00759 720 MobiDBLite consensus disorder prediction 698 720 - -
Bva06g00759 720 Gene3D - 91 411 - -
Bva06g00759 720 Pfam Ion transport protein 88 412 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Bva06g00759 720 Pfam Cyclic nucleotide-binding domain 509 597 IPR000595 -
Bva06g00759 720 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 51 717 - -
Bva06g00759 720 MobiDBLite consensus disorder prediction 698 713 - -
Bva06g00759 720 Gene3D Jelly Rolls 484 604 IPR014710 -
Bva06g00759 720 SUPERFAMILY cAMP-binding domain-like 416 608 IPR018490 -
Bva06g00759 720 CDD CAP_ED 486 617 IPR000595 -
Bva06g00759 720 MobiDBLite consensus disorder prediction 655 674 - -
Bva06g00759 720 MobiDBLite consensus disorder prediction 1 27 - -
Bva06g00759 720 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 51 717 - -
Bva06g00759 720 SMART cnmp_10 486 617 IPR000595 -
Bva06g00759 720 PRINTS EAG/ELK/ERG potassium channel family signature 381 392 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g00759 720 PRINTS EAG/ELK/ERG potassium channel family signature 449 456 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g00759 720 PRINTS EAG/ELK/ERG potassium channel family signature 399 408 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g00759 720 PRINTS EAG/ELK/ERG potassium channel family signature 263 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g00759 720 PRINTS EAG/ELK/ERG potassium channel family signature 146 155 IPR003938 GO:0005249|GO:0006813|GO:0016020
Bva06g00759 720 Gene3D Helix hairpin bin 414 477 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00759 Bva-Chr6 7059966 7065677 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00759 1 720 Ion Channels AT4G30360 70.604 0.0 1026
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00759 K05391 - gmx:100808425 1221.07