Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00752 ATGCCAGACATGCAGAAACATTTTCATGCATATCTTTCATTCCTCTGCTTTCCCTTTCTATGCATCTTTTTGGGAAAAGCTTTGATGGCGAAGGAGATCATACCAATAGGGGTAGTTCTTGATTTGAACACCTCAGTGGGAATTATGGCTAACAGCTCCATGTTTATTGCACTCCAAGATTTCTATAGACAAAATCCTCACTATAAAACCAGACTTGATCTTCGAATCAGCGATTCTGAGAATGACGTTGTCAAATCTGCATCTGCAGctttatattttatagagaagagaaaagtgcACGCCATCATTGGACCTCAATCATCAGAACAAGCAAGGTTCATAATACAACTTGGGCGCAAATATAGCGTACCCATCCTTTCGTTTTCGGCCACAAGTCCATCTCTTTCCCCaaatcgaagccaaattttCATTCGTACGGCACAAGACGATCGCTCTCAGACGAAAGCCATCGCTGACGTAGTTGAAGCTTACGGTTGGAGGGAGATCATTCTAATATATGAAGACACGGAATATGGGAATGGCCTCATCCCCTATCTCGACGATGCCTTGGAAGCAATTGACACACGAGTGCGTTACAGAAGTGTCATTGATCCACGTTCTAATGACAGaaaaagccaaatttcaaaagaGCTCAAGAATCTAAAGCACAAGctgacaaaaatatttcttgttcATATGACAGCTGACCTTGGGTCTGTGTTTTTTCCAGCTGCACAGGAAGCTGGAATGATGAAAGCGGGGTATGGGTGGATAGTCACTCAAGGACTATCTGCGTCGCTAGATCCAACGGTTCCAAACATAATGGACTCAATGCAGGGTGTCATAGGAGTGAGGCCAAGGGTACCCCACACTGAAAGGCTTGAGGACTTCAAAAGAAGATGGAAATCCTCAGTTGAAGTAAACAGCGAGTCCCCTTCGGTAACCCTCTTTGGATTGTGGGCTTATGATACAGTTTGGGCATTGGCAATGGCAGTAGAGAGAAGACAAAATGTCACAAACAAAACCAGGGTGAGGCCAAGCCTTCTCAACGAAATTCTGGCCACTAATTTCTCAGGACTCTCGGGGAATTTCAGTTTGGTTAATAGACAATTAGAGCCACCAGAActtgaaatattcaatttgataGGATCTACAGAGAGGACTATTGGAAGATGGAGCCCAAAGAGTTCCCAGAACAagtcaaaagagaaagagaaactcAAGCCTCCAATATGGCCAGGTGACACAACAGAGCAACCTACAAAATTGAGAATTGGGGTCCCCGACAAAAAGggttttaatgaatttatgaaagtAGAAAGGCATTCTCCGAATGGTATAACTGTTTCTGGGTTTGCCATCGATGTCTTTCTTGAAGTGGTGAAAGTTTTACCCTTTCCCCTTCCTTACGAGTTTAAGCCACTCGAGAAAAATGGGACCTATGATGAACTTTTGCAACAGATTCACCTAAAGAAATTCGATGCTGTGGTTGGAGACATAACAATCATTGCTAACCGCACAAATTATGTAGACTTCACGTTGCCGTATACAGAATCAGGAGTTTCCATGGTGGTTCCCATGAAGCACGATGAGAGAGGAAACATGTGGATCTTCTTAAAGCCTCTGAGTATGAGTCTTTGGCTGACAACCGGTGCAGCATTCGGTCTCACAGGTTTCATTATATGGTTGCTTGAACACCGTTCAAACACCGAGTTTCGGGGCTCCCCAGAGCAACAGCTGGGTACCATGTTCTGGTTTTCATTCTCTACACTCGTTTTTGCTCACAAGGAGAAAGTAGTGAACAATTGGTCGCGATATAAGATGGTTGGACCAACCTACAAAACCGATGGATTTGGCTTTGCATTCCCGCTAAAATCTCCTCTGGTATCTTATTTTTCAAGGGCAATCTTAAATGTGACTGAAGATTCggataaatttgaaaggatAAAGAACAAGTACTTCTCATTCTCAAGCAGGTTTACATGTGAAGAAGATCAAAGTGCCTCAATTACTCTGGATAGTCCAAGTCTTACTGTTTACAGCTTTGCTGGTCTCTTCGTCATCACCGGAGCCACTTCGCTGCTCTCACTTGTGTGCTATTTGTGTTGCTCATTCCCATACTCTCAATGGCCTCGTTTCAGGAGCATTAATCCTTCTCAAGACAGATCCTTTTGGTTGGCGCTGACTGAAATGGGGAAGCATTTTCATCAGAAAGATAGCTCCAATTCATATCCTccaaatagaaatagaagtgACTCCGGAGTACACCCTTCAACAGATGAAGCTTCCTTTACTTGTCATGCTGATGCGGATGCTGACGATGCCATTGTCatttg 2336 0.408 MPDMQKHFHAYLSFLCFPFLCIFLGKALMAKEIIPIGVVLDLNTSVGIMANSSMFIALQDFYRQNPHYKTRLDLRISDSENDVVKSASAALYFIEKRKVHAIIGPQSSEQARFIIQLGRKYSVPILSFSATSPSLSPNRSQIFIRTAQDDRSQTKAIADVVEAYGWREIILIYEDTEYGNGLIPYLDDALEAIDTRVRYRSVIDPRSNDRKSQISKELKNLKHKLTKIFLVHMTADLGSVFFPAAQEAGMMKAGYGWIVTQGLSASLDPTVPNIMDSMQGVIGVRPRVPHTERLEDFKRRWKSSVEVNSESPSVTLFGLWAYDTVWALAMAVERRQNVTNKTRVRPSLLNEILATNFSGLSGNFSLVNRQLEPPELEIFNLIGSTERTIGRWSPKSSQNKSKEKEKLKPPIWPGDTTEQPTKLRIGVPDKKGFNEFMKVERHSPNGITVSGFAIDVFLEVVKVLPFPLPYEFKPLEKNGTYDELLQQIHLKKFDAVVGDITIIANRTNYVDFTLPYTESGVSMVVPMKHDERGNMWIFLKPLSMSLWLTTGAAFGLTGFIIWLLEHRSNTEFRGSPEQQLGTMFWFSFSTLVFAHKEKVVNNWSRYKMVGPTYKTDGFGFAFPLKSPLVSYFSRAILNVTEDSDKFERIKNKYFSFSSRFTCEEDQSASITLDSPSLTVYSFAGLFVITGATSLLSLVCYLCCSFPYSQWPRFRSINPSQDRSFWLALTEMGKHFHQKDSSNSYPPNRNRSDSGVHPSTDEASFTCHADADADDAIVI 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00752 778 MobiDBLite consensus disorder prediction 736 762 - -
Bva06g00752 778 Gene3D - 417 535 - -
Bva06g00752 778 MobiDBLite consensus disorder prediction 738 760 - -
Bva06g00752 778 Pfam Ligand-gated ion channel 543 691 IPR001320 GO:0015276|GO:0016020
Bva06g00752 778 PANTHER GLUTAMATE RECEPTOR 34 605 - -
Bva06g00752 778 PANTHER GLUTAMATE RECEPTOR 604 703 - -
Bva06g00752 778 PIRSF IGluLR_plant 603 775 IPR017103 -
Bva06g00752 778 PIRSF IGluLR_plant 4 606 IPR017103 -
Bva06g00752 778 CDD PBP1_GABAb_receptor_plant 36 397 IPR044440 -
Bva06g00752 778 SMART GluR_14 422 656 IPR001320 GO:0015276|GO:0016020
Bva06g00752 778 MobiDBLite consensus disorder prediction 397 411 - -
Bva06g00752 778 SUPERFAMILY Periplasmic binding protein-like I 31 393 IPR028082 -
Bva06g00752 778 Pfam Receptor family ligand binding region 51 383 IPR001828 -
Bva06g00752 778 SUPERFAMILY Periplasmic binding protein-like II 418 655 - -
Bva06g00752 778 CDD GluR_Plant 422 654 - -
Bva06g00752 778 Gene3D - 68 373 - -
Bva06g00752 778 Gene3D - 149 396 - -
Bva06g00752 778 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 34 605 - -
Bva06g00752 778 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 604 703 - -
Bva06g00752 778 Pfam Bacterial extracellular solute-binding proteins, family 3 449 528 IPR001638 -
Bva06g00752 778 MobiDBLite consensus disorder prediction 390 420 - -
Bva06g00752 778 Gene3D - 536 612 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00752 Bva-Chr6 7009588 7012665 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00752 604 739 Ion Channels AT2G29110 40.441 8.81e-18 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00752 K05387 - qsu:111985464 688.337