Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00751 ATGACGGCTGAGCATGGGTCCAAGTTATTCTCGGCTGCAAAAAATGTTGGAATGATGAAAGAAGGGTATGCGTGGATAGTTACCGAAGGACTATCTACTCTGCTCGACCCTGTGGATGCAAAGGCGAAGGACTCCATGGGAGGTGTGTTGGGAGTAAGGCCATTGGTGCTAGAATTTGAGAACTTCACAAGAAGATGGAAATCCTACTCATACGCAGGGAAGGAAAGGACAAGCAGTGAATCCCCATTGACCCTCTTCGGGCTGTGGGCTTATGACACAGTTTGGGCGTTGGCAATGGCAGTAGAGAAGGCTGGATTAACAAATTCTAATTCCTTCCAAAGCCAAAATGTTGCAAATAACACCGAACTTGATTTTGCAAACATAGTTTGGTATGAAACGGGTCCAAGGCTTCGCGACGAGATTCTAGCTACTAATTTTACAGGAGTCTCTGGGAATGTCAGTTTGATTAATGGACAGCTAGAGCCATCCGAGATTGAAATATTCAATGTGGTAGGACATACAGAGAAGATTATTGGAAAATGGAGTTCAAACAAGTTGACTTTAAAAGAGGAACTCAAGCCACCTATATGGCCGGGTGACACAACAGAGCGACCTACAAAGATGAGAATTGGGGTCCCAGTAAGAAAGAGCTTTAATGAATTTCTCAGAGTAGAAAGCCCATCCCCAAAATGTATAGAATATTCTAGAGAGAACATTTCTGGGTTTGCTATTGATGTGTTTCAAGAAGTGCATAGATTTTTACCCTTTAACCTTTCTTATGAGTTCTGCCCTTTCGCGAAAAGGAATGGGGACTCGAATGGGACCTATGATCAGCTTGTTATGCAGATTGAAGAAAAGAATTTTGATGCCGTAGTAGGAGACGTAACAATAGTTGCTAATCGTACAAAATATGTTGACTTTACATTGCCATATTCAGAATCTGGGGTGTCCATGGTGGTTCGGATGAAGCAAGACAAGAGGAATAACATGTGGATCTTCTTAAAGCCTCTGAGCTGGGATATGTGGTTAACTACATTTGCAGCTTTCATCTTCACAGGTGTCGTTATATGGCTTCTCGAACACCGTACAAATCCAGAATTTGGGGGTTCCCCACAGCAACAAGTTGGCataatattttggttttccttCTCAACACTTGTCTTTGCTCACAAGGAGAAAATAGTGAACAATTGGTCGCGGTTGGTGCTGATTGTATGGGTATTTGTGGTATTGATTATAACACAAAGTTACACTGCCAGTTTAGCTTCAATGTTAACAGTTCAGAGACTGCAGCCTGCTTTCATGGACATAAAAGAGATCCAGAGGAATAATTACTCTGTCGGATACCAGACCGGATCATTTGTAGAAAAGCTCCTCACAGAACAATTGGGATTCAGCGAGTCCAAGTTGAAGTCTTATCAAACACCTCAAGAGTTTCATGAAGCCCTATCCAATGGTAGCGTGGCTGCCATATTCGATGAAATCCcatatctgatcgtcttcctCAAAAATCATGGTTCTAAATATCATATGGTTGGACCTGTCTATAAGACTGGTGGATTTGGCTTTGCATTCCCACTAAATTCTCCTCTGGTCTCCGACTTTTCCAAGGCAATCTTAAAAgtgattgaaaatgaaacatttCAAGACAGAATTCAGAAGAAATACTTCTCGACCAGTGAAATCATATTTGACGACGGAAGTGCCTCTGTTTCATCAGATAGTTCGAGTTTGACAGTGCACAGCTTTGGGGGACTCTTCATCGTCACATTAGCAGCTTCACTGATCTCTCTCATATTCTATGTATTCAAGTTCCTGCATTCTCAGTGGCCTGCATTGAAAGAAATCCATTCTGATCAGGGATCCCTTTGGGTAGCATTTACCGAAATGGTAAAGCGTTTTGATCGAAAAGACTCTTTTGCTCGTGCGAGTAGAAGCAACTCGAGAGTATTTCCAgaagcaaatccaaatccaGCAACAGATGAAGCTTCTGTCAATGTTGATGATACCGCAGACAACGAATCAACAACTCTGAATCAACAATCAGATGTCGCTACGCTAAACGAACACAATCAGATGGATTCTGGTATTAATCATTCGGTTCCAGATGAGCGTCACTCGTCCTA 2126 0.4097 MTAEHGSKLFSAAKNVGMMKEGYAWIVTEGLSTLLDPVDAKAKDSMGGVLGVRPLVLEFENFTRRWKSYSYAGKERTSSESPLTLFGLWAYDTVWALAMAVEKAGLTNSNSFQSQNVANNTELDFANIVWYETGPRLRDEILATNFTGVSGNVSLINGQLEPSEIEIFNVVGHTEKIIGKWSSNKLTLKEELKPPIWPGDTTERPTKMRIGVPVRKSFNEFLRVESPSPKCIEYSRENISGFAIDVFQEVHRFLPFNLSYEFCPFAKRNGDSNGTYDQLVMQIEEKNFDAVVGDVTIVANRTKYVDFTLPYSESGVSMVVRMKQDKRNNMWIFLKPLSWDMWLTTFAAFIFTGVVIWLLEHRTNPEFGGSPQQQVGIIFWFSFSTLVFAHKEKIVNNWSRLVLIVWVFVVLIITQSYTASLASMLTVQRLQPAFMDIKEIQRNNYSVGYQTGSFVEKLLTEQLGFSESKLKSYQTPQEFHEALSNGSVAAIFDEIPYLIVFLKNHGSKYHMVGPVYKTGGFGFAFPLNSPLVSDFSKAILKVIENETFQDRIQKKYFSTSEIIFDDGSASVSSDSSSLTVHSFGGLFIVTLAASLISLIFYVFKFLHSQWPALKEIHSDQGSLWVAFTEMVKRFDRKDSFARASRSNSRVFPEANPNPATDEASVNVDDTADNESTTLNQQSDVATLNEHNQMDSGINHSVPDERHSS 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00751 708 SUPERFAMILY Periplasmic binding protein-like I 2 206 IPR028082 -
Bva06g00751 708 PANTHER GLUTAMATE RECEPTOR 1 609 - -
Bva06g00751 708 Gene3D - 471 563 - -
Bva06g00751 708 Pfam Receptor family ligand binding region 3 171 IPR001828 -
Bva06g00751 708 Gene3D - 100 213 - -
Bva06g00751 708 Gene3D - 214 328 - -
Bva06g00751 708 Gene3D - 1 86 - -
Bva06g00751 708 MobiDBLite consensus disorder prediction 645 708 - -
Bva06g00751 708 CDD GluR_Plant 207 557 - -
Bva06g00751 708 Pfam Bacterial extracellular solute-binding proteins, family 3 229 558 IPR001638 -
Bva06g00751 708 MobiDBLite consensus disorder prediction 645 698 - -
Bva06g00751 708 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 1 609 - -
Bva06g00751 708 Gene3D - 329 470 - -
Bva06g00751 708 SUPERFAMILY Periplasmic binding protein-like II 235 557 - -
Bva06g00751 708 SMART GluR_14 209 559 IPR001320 GO:0015276|GO:0016020
Bva06g00751 708 Pfam Ligand-gated ion channel 559 593 IPR001320 GO:0015276|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00751 Bva-Chr6 7005660 7008512 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00751 1 638 Ion Channels AT2G29110 42.018 1.94e-155 473
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00751 K05387 - qsu:111985484 720.309