Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00747 ATGGCAAAGGAAAATTACTATACCTgccttctattttattgtcttttcctCTCCGTTGCTCAGTTCGGAGGTGCTGTTCCACTCTTAGGAGGGAAGAAATTAATAGTTGggataccaaaaaataaaggttTCGACCAATTTGTTGACGTAAAACTGAACTCTAGTACAAACCAAGTGGTCGATGTCACTGGCTACTCCATTGAAGTTTTCAATGCCACAGTAAATCATCTCTTGCAGTTAGGTTTCAACGTTTCTTATGAATTCCAAGCTTTCGTAGACAGAACTGGGAAACGAGCTGGGTCTTACGACCAACTTCTGCAACAGATTCCTGCTCGaaagtaTGACGTTGTGGTGGGAGACATAACGATTGTGGCCAACCGTGCAAATTATGTGGATTTTACTTTACCATACGCTGAGTCGAGTACAAGAATGCTGGTCAGAGTTCAGCAAAATCAACACTTGAATATGTGGATTTTTCTACGACCTTTTAGCTGGGATCTTTGGCTGACCGTAGTCCTGGCCTGTATCTTCATTGGAGCAACTTTACGGTTCATGGAACGTAAGGTAAATAGAAAtgcagaaaatgaaagtgaagAAGGTTCAACACGGCGAAGACCTTCTACAGCGGTATCAATGTTGTGGCTTCCTTTAGTACAAATGGTGCTACCTGAAAGAGAGTCGGTTGCCAAGAACTGCTCCAAGTTTGTGTTGGTGGTATGGTTGTTATTGGCATTTGTTCTTATGCAAAGTTACACAGCAAGCTTGTCATCAATCTTGACATTGGACCAATTGCAACCTACCTACCCTACACTGAATGatctaaaaagaaatggagaatATGTTGGATATCCCACTTCTTCCTATGTACTAGATATGATGGTGGACAGCTTCAAGTTTGACAAATCAAAGCTAAAGGAATGCATCGGCATTGAAGATTATCGAGAGGCTTTAGACAAAGGAAGCCGCAATGGTGGGGTTGCCGCTATTTTTGACGAAGAGCCCTACATTAAGGTCTTCCTTAAAAGATATGGTTCCAAATACTACAAGATGGTTGGGCCTTACTACCGTACAgctggttttggttttGCATTTCCAAGAAACTCGAGCCTCGCCTCTTACTTCTCAAGAGCTATATTAAATGTCATTGAAAGTGACGTGATGAAAGAGATTGAACAGAAGTATTTTGGTagcaatgaagatgaagagctCCAAAACCAATCTAACGCGTCATTAGACAGTCGCAACCTCACAACACATAGCTTTGCAGGCTTGTTCATGATCACCGGATTTCTCACTTTTCTCGCTGTGCTAGTCTCAGAAAGTCCGACTTGGCAAAAGCCTCTTAAGCTTGCTAAGATTCATAGCCAGACTTATTTATTCTCCCTACTTTCTAAAAAAACTAACCAATCAGAGGACGGATCTATGAATGTTAGCTCAACACAACAACCAAACCACCAAGAAATACATTCAATATCTCACGAGGGTCTACCTATTGAAACATTGCCcgtgta 1511 0.3845 MAKENYYTCLLFYCLFLSVAQFGGAVPLLGGKKLIVGIPKNKGFDQFVDVKLNSSTNQVVDVTGYSIEVFNATVNHLLQLGFNVSYEFQAFVDRTGKRAGSYDQLLQQIPARKYDVVVGDITIVANRANYVDFTLPYAESSTRMLVRVQQNQHLNMWIFLRPFSWDLWLTVVLACIFIGATLRFMERKVNRNAENESEEGSTRRRPSTAVSMLWLPLVQMVLPERESVAKNCSKFVLVVWLLLAFVLMQSYTASLSSILTLDQLQPTYPTLNDLKRNGEYVGYPTSSYVLDMMVDSFKFDKSKLKECIGIEDYREALDKGSRNGGVAAIFDEEPYIKVFLKRYGSKYYKMVGPYYRTAGFGFAFPRNSSLASYFSRAILNVIESDVMKEIEQKYFGSNEDEELQNQSNASLDSRNLTTHSFAGLFMITGFLTFLAVLVSESPTWQKPLKLAKIHSQTYLFSLLSKKTNQSEDGSMNVSSTQQPNHQEIHSISHEGLPIETLPV 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00747 503 MobiDBLite consensus disorder prediction 470 503 - -
Bva06g00747 503 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 11 462 - -
Bva06g00747 503 SUPERFAMILY Periplasmic binding protein-like II 7 398 - -
Bva06g00747 503 Gene3D - 28 155 - -
Bva06g00747 503 MobiDBLite consensus disorder prediction 470 489 - -
Bva06g00747 503 SMART GluR_14 33 397 IPR001320 GO:0015276|GO:0016020
Bva06g00747 503 Gene3D - 156 307 - -
Bva06g00747 503 Pfam Bacterial extracellular solute-binding proteins, family 3 62 396 IPR001638 -
Bva06g00747 503 PANTHER RECEPTOR 3.3, PUTATIVE-RELATED 11 462 - -
Bva06g00747 503 CDD GluR_Plant 32 395 - -
Bva06g00747 503 Pfam Ligand-gated ion channel 397 429 IPR001320 GO:0015276|GO:0016020
Bva06g00747 503 Gene3D - 336 402 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00747 Bva-Chr6 6991549 6994032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00747 23 438 Ion Channels AT2G29120 40.426 1.77e-78 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00747 K05387 - aip:107641909 514.227