Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00745 ATGGGGTCCTCCCTCAGTTGCTGTGGTTCAGAACAGGCCGAAAAAGgGCCAAAAACCCTTGGTGAGGTTAACAATTCATGGAGAATATTCACATACAAGGAGCTGCACACAGCCACTAATGGTTTCAATGAGGATAATAAACTTGGTGAAGGTGGATTTGGAAGTGTCTACTGGGGAAGAACCAGCGATGGTCTAGAGatagcagtgaagaaattgaaagcaaTGAACACAAAGGCTGAAATGGAATTTGCAGTAGAAGTGGAAGTTCTTGGAAGGGTTCGGCACAGAAATCTTCTGGGCCTGAGGGGTTATTATGCCGGGGCTGATCAACGGCTCATAGTCTATGATTATATGCCAAATTTCAGCCTACTTTCTCATCTCCATGGTGAATTTGCTCGCGAAGTCAAACTCGATTGGAAAAGGAGAATGAACATTGCTATTGGCTCTGCAGAAGGCATATTATACTTGCATCACGAGGTAACACCTCACATAATTCATAGAGATATCAAAGCAAGTAATGTTCTCTTAAATTCAGATTTTGAACCTTTAGTTGCTGATTTTGGGTTTGCAAAGTTAATCCCAGAAGGAGTTAGTCATATGACTACCCGTGTTAAAGGTACTTTGGGATACTTAGCACCTGAATATGCTATGTGGGGAAAAGTTTCTGAAAATTGTGATGTTTATAGCTTTGGAATTCTTCTTTTCGAACTGATCACGGGAAGAAAACCCATAGAAAAACTTCCCGGTGGGGTTAAGAGAACAATAACTGAATGGGCTGAGCCGTTGATTACAAAAGGAAAACTCAAGGATTTGGTTGACCCAAGACTTGGGggaaattttgatgaaaaccAAGTGAGACAAGCTATCCATGTTGCTGCTCTTTGTGTGCAAAGTGAACCTGAGAAGCGACCCAACATGAAGCAAGTGGTTAACCTTCTAAAAGGTTACGATGCTGGTGACAAAGTCAAAGTGATCCAGACGAGGATGGATAGTATAAAATACAATGAAGAATTACTGGCACAAGACCAAACAGATGACGATGACGACGATGAAACCAACGGTGGTTATGGTGTTTTTAGTGCCCTTGACGTGCAAAAGATGCATGTTCCATACAAGGGCAGTGCAGACAAGAAAATGGGTAAACCCGTTTG 1151 0.4075 MGSSLSCCGSEQAEKGPKTLGEVNNSWRIFTYKELHTATNGFNEDNKLGEGGFGSVYWGRTSDGLEIAVKKLKAMNTKAEMEFAVEVEVLGRVRHRNLLGLRGYYAGADQRLIVYDYMPNFSLLSHLHGEFAREVKLDWKRRMNIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLNSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSENCDVYSFGILLFELITGRKPIEKLPGGVKRTITEWAEPLITKGKLKDLVDPRLGGNFDENQVRQAIHVAALCVQSEPEKRPNMKQVVNLLKGYDAGDKVKVIQTRMDSIKYNEELLAQDQTDDDDDDETNGGYGVFSALDVQKMHVPYKGSADKKMGKPV 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00745 383 PANTHER PTI1-LIKE TYROSINE-PROTEIN KINASE 1 381 - -
Bva06g00745 383 Gene3D Phosphorylase Kinase; domain 1 13 117 - -
Bva06g00745 383 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00745 383 Pfam Protein kinase domain 42 311 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00745 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Bva06g00745 383 SUPERFAMILY Protein kinase-like (PK-like) 24 319 IPR011009 -
Bva06g00745 383 ProSiteProfiles Protein kinase domain profile. 42 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00745 383 Gene3D Transferase(Phosphotransferase) domain 1 118 330 - -
Bva06g00745 383 CDD STKc_IRAK 48 315 - -
Bva06g00745 383 PANTHER OS01G0750732 PROTEIN 1 381 - -
Bva06g00745 383 ProSitePatterns Protein kinases ATP-binding region signature. 48 71 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00745 Bva-Chr6 6972221 6973766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00745 30 366 Trihelix Transcription Factor Family AT1G70460 46.552 2.66e-92 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Bva06g00745 Pkinase 4.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00745 - - gsj:114393039 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00745 06 6972221 6973766 Bva06g00745 06 6972221 6973766 ECH