Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00743 ATGGGAATTGAGCGAGGAGGCCTCAAGGGCTTTAGGAGTGGGTGGATTGTGCCGGCGAAGCCTTGTGACTCCTGCAAATTGTCGGCGGCGGCGATGTTCTGCCGAGCCGATTCGGCGTTCCTGTGCATTTCGTGTGATAACAAAATACACTGCGTCAATAAGCTGGCTTCCCGCCACGAGCGCGTGTGGATGTGCGAGGTGTGCGAGCAAGCCCCCGCCTCCGTCACGTGCAAAGCGGATGCGGCTGCTCTCTGCATCACGTGCGATTCCGATATCCACTCGGCCAATCCTCTTGCACGTCGTCACGAGCGTGTCCCGGTGGAGCCATTCTTCGACTCGGCCGAGTCGATAGTGAAACCCTCGGCGGCTTTTAACTTCGTCGTTCCAACTGATATCGGGGTTGGGTCCGATGGGTTCAACCAGGAAGATACGGAAGCGGCGTCGTGGCTTATTCCCAACCCGAATTTCAATTCGAAGCTGGTGGATGGTCCGGATATCAAGTCtggtgaaatatttttatccgAAATGGATCCGTTTCTGGAATTTGATTACTCAAATTCATTTCAGAATAACAACAGCGCGGGTAATGATAGCGTAGTACCAGTTCAAAGCAAACCCACTCCGTTGGCGGTGGCGAATCACTCTGAGGCTTGTTTCGACATCGATTTTTGCAGATCCAAGCTCTCCTCCTTTAATTACCCAACCCAGTCTATTAGCCAAAGCgTTTCATCTTCTTCGCTCGACGTCGGAGTGGTTCCGGATGGAAACTCGGTTTCAGAAATTTCCTACTCTTTTGTCAGAAACACGAGCAACAGTCCTTCGGAGTCAAGTGGAATGGTCTCCGGCGGTAATATTAACCCAGCGAATATGGACCGCGAGGCTAGGGTGTTGAGATacagagagaaaaggaagaacagaaaatttgaaaaaaccATTCGCTACGCTTCCAGAAAAGCATACGCCGAAACCCGCCCAAGAATCAAGGGCCGGTTCGCCAAACGAACCGAAATGGATTCGGAGGTCTATAGTCCTGCGCCCGCCGCCCATTCATCCCTCATGCTTGATGTTCACTACGGCGTCGTTCCATCCTTTTA 1094 0.5 MGIERGGLKGFRSGWIVPAKPCDSCKLSAAAMFCRADSAFLCISCDNKIHCVNKLASRHERVWMCEVCEQAPASVTCKADAAALCITCDSDIHSANPLARRHERVPVEPFFDSAESIVKPSAAFNFVVPTDIGVGSDGFNQEDTEAASWLIPNPNFNSKLVDGPDIKSGEIFLSEMDPFLEFDYSNSFQNNNSAGNDSVVPVQSKPTPLAVANHSEACFDIDFCRSKLSSFNYPTQSISQSVSSSSLDVGVVPDGNSVSEISYSFVRNTSNSPSESSGMVSGGNINPANMDREARVLRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRTEMDSEVYSPAPAAHSSLMLDVHYGVVPSF 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00743 364 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 8 364 - -
Bva06g00743 364 MobiDBLite consensus disorder prediction 269 284 - -
Bva06g00743 364 Pfam B-box zinc finger 62 107 IPR000315 GO:0008270
Bva06g00743 364 ProSiteProfiles CCT domain profile. 292 334 IPR010402 GO:0005515
Bva06g00743 364 CDD Bbox1_BBX-like 65 107 - -
Bva06g00743 364 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 8 364 IPR045281 GO:0009909
Bva06g00743 364 MobiDBLite consensus disorder prediction 269 293 - -
Bva06g00743 364 CDD Bbox1_BBX-like 21 64 - -
Bva06g00743 364 ProSiteProfiles Zinc finger B-box type profile. 60 107 IPR000315 GO:0008270
Bva06g00743 364 Pfam CCT motif 292 334 IPR010402 GO:0005515
Bva06g00743 364 SMART bboxneu5 17 64 IPR000315 GO:0008270
Bva06g00743 364 SMART bboxneu5 65 107 IPR000315 GO:0008270
Bva06g00743 364 ProSiteProfiles Zinc finger B-box type profile. 17 64 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00743 Bva-Chr6 6958921 6960541 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00743 1 364 C2C2-CO-like Transcription Factor Family AT5G57660 53.826 3.74e-123 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-CO-like Bva06g00743 zf-B_box 1.2e-06 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00743 - - gmx:100805693 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00743 06 6958921 6960541 Bva06g00743 06 6958921 6960541 ECH