Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00739 ATGGGGTTTGCAAACAACGTTGGTAAGTATCGGCTTGGTCGGACAATTGGAGAAGGTACTTTCGCCAAGGTTAAGCTGGGTGTCAACAGCGACAATGGCCAATATGTTGCTATGAAGATCATTGATAAGCAAATGGTCCTGAAAAGTGATCTCAAGTATCAGGTCCAAAGAGAGATAAGAACAATGAAGCTTCTTCATCATCCAAACATAGTAAGAATTCACGAGGTTATTGGCACAAAGacgaaaatatatattgtaatggAATATGTGGCAGGAGGACAACTATCAGACAAGCTTTCTTATAACAGGAAGTTCGATGAATGCGAGGCAAGGAAAATGTTCCAGCGACTAATTGATGCCGTTGACTACTGCCATAACAAAGGAGTTTACCATAGAGATCTCAAGCCAGATAACTTGCTTCTAGACAGCAATGGAAATCTTAAAGTATCTGACTTTGGACTCAGCACTCTGCGAAAGCCCAATGATCTTCTAACCACGGCGTGTGGCTCCCCATGCTATGTGGCACCTGAGCTGCTATGGAACAAGGGATACCATGGAGCGGCTGCTGATGTTTGGTCATGTGGGGTAATCCTTTTTGAATTACTTGCGGGTTATCTACCATTTGACGACCGAAACTTGTTGAGCTTGTATAAAAAGATAAGCAGAGCAGAATACGCATGTCCACCATGGTTTACACAAAGTCAAAGGAAACTAATTGCTAGAATACTTGAACCAAATCCTAGAAAgAGGATAACTATATTAGAGATTGTTGAAGATGCATGGTTTCAAATAGATTATGTTACTGCTTGCGAATATGAAAGTGATCAAGACATTTACTTGGACGATGTTAATGCTGCTTTTGATTCAGTTGAGGAGCAAGGGACGGAGACAAAGGTAACCAAGTCCCCAAGTTTCATAAATGCTTTCCAATTAATAGCCATGTCCCAGGATCTTGATCTATCAGGTCTGTTTGAAGAACAGGATCAAAAAAAGCAGACAAAAAGGCTTGGGTCCACGCACAATATCAATGAAAccatagaaaaaatagaagctgCCGCAGCAGATGTGAGATTGTCagtagaaagaattaaaaactcCAAGATAAGAATGCTTCCCAAACAGATGATGACTAGATGTAGCAGATCATATTTTGACCTATCAGCCGAGGTGATTGAAGTTGCTCCAACTCATTGTGTTGTAGAAATATCTAAATCATCAGGAGACTTAAGAATGTATAATGACTTTTGCGAAAGTCTGTCAAGTCTGCTGTCAAAAAGCTCCGGTGTCCTATCACAAACACAAGAAGAGTCTTTGGAAGTACACGTCACTTGCAAAATTGACCGAGGTGATGGAAGCTCGGAGGAGTTAAGTTGTGAAGATAATGAAGGCCTACGTGGCTATGCGTCTGCTTA 1412 0.3966 MGFANNVGKYRLGRTIGEGTFAKVKLGVNSDNGQYVAMKIIDKQMVLKSDLKYQVQREIRTMKLLHHPNIVRIHEVIGTKTKIYIVMEYVAGGQLSDKLSYNRKFDECEARKMFQRLIDAVDYCHNKGVYHRDLKPDNLLLDSNGNLKVSDFGLSTLRKPNDLLTTACGSPCYVAPELLWNKGYHGAAADVWSCGVILFELLAGYLPFDDRNLLSLYKKISRAEYACPPWFTQSQRKLIARILEPNPRKRITILEIVEDAWFQIDYVTACEYESDQDIYLDDVNAAFDSVEEQGTETKVTKSPSFINAFQLIAMSQDLDLSGLFEEQDQKKQTKRLGSTHNINETIEKIEAAAADVRLSVERIKNSKIRMLPKQMMTRCSRSYFDLSAEVIEVAPTHCVVEISKSSGDLRMYNDFCESLSSLLSKSSGVLSQTQEESLEVHVTCKIDRGDGSSEELSCEDNEGLRGYASA 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00739 470 Gene3D Kinase associated domain 1, KA1 300 426 - -
Bva06g00739 470 ProSitePatterns Serine/Threonine protein kinases active-site signature. 129 141 IPR008271 GO:0004672|GO:0006468
Bva06g00739 470 ProSiteProfiles Protein kinase domain profile. 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00739 470 MobiDBLite consensus disorder prediction 450 470 - -
Bva06g00739 470 Pfam NAF domain 303 361 IPR004041 GO:0007165
Bva06g00739 470 Gene3D Phosphorylase Kinase; domain 1 3 89 - -
Bva06g00739 470 Pfam Protein kinase domain 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00739 470 ProSiteProfiles NAF domain profile. 301 325 IPR018451 GO:0007165
Bva06g00739 470 PANTHER CBL-INTERACTING SERINE/THREONINE-PROTEIN KINASE 21-RELATED 6 426 - -
Bva06g00739 470 CDD CIPK_C 307 417 - -
Bva06g00739 470 ProSitePatterns Protein kinases ATP-binding region signature. 16 48 IPR017441 GO:0005524
Bva06g00739 470 SMART serkin_6 10 262 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00739 470 PANTHER SERINE/THREONINE KINASE 6 426 - -
Bva06g00739 470 SUPERFAMILY Protein kinase-like (PK-like) 7 308 IPR011009 -
Bva06g00739 470 Gene3D Transferase(Phosphotransferase) domain 1 90 285 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00739 Bva-Chr6 6937887 6940806 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00739 87 424 CBL-interacting serine-threonine protein kinases AT5G57630 62.059 1.47e-144 415
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Bva06g00739 Pkinase 4.3e-72 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00739 - - hbr:110657823 675.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00739 06 6937887 6940806 Bva06g00739 06 6937887 6940806 ECH