Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00723 ATGAATTTCCAACCTAACACTTCTCTTCATCTAAGTTGTCTACCTGATAAGAATCCACTCAACTTAGATCTTCTCCTTGAgccatcttcttcctcttcttcttcatcttcaccaACTAGTTCTTCCATTGAGCCTCGTATTTTCTCATGCAACTATTGCCAGAGGAAGTTTTACAGCTCGCAGGCACTGGGAGGGCACCAGAATGCTCACAAGCTGGAAAGGACACTGGCAAAGAAGAGCAGAGAGCTTAGTTCAGCCATGGAAACTGGTGATGGATCAGGACCAGAGCAGCGTTCATACCATGCTGGGCGTGTTGGATTGGAGAACCAAGGACAAATTAGTGGGAGAGATGTTGCTGGTGGAGTAAGCCATGAAAGGAGAGAAACTGAGTATGTTTATAATGAAGGCGTGGTGGGATCTTGGTCCAGGGTTTATGGGTCTGAAAATGTTCAGGATGATATGAGCCAACTTGACTTGTCATTGAGACTTTG 491 0.4216 MNFQPNTSLHLSCLPDKNPLNLDLLLEPSSSSSSSSSPTSSSIEPRIFSCNYCQRKFYSSQALGGHQNAHKLERTLAKKSRELSSAMETGDGSGPEQRSYHAGRVGLENQGQISGRDVAGGVSHERRETEYVYNEGVVGSWSRVYGSENVQDDMSQLDLSLRL 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00723 163 Coils Coil 69 89 - -
Bva06g00723 163 ProSiteProfiles Zinc finger C2H2 type domain profile. 48 75 IPR013087 -
Bva06g00723 163 ProSitePatterns Zinc finger C2H2 type domain signature. 50 70 IPR013087 -
Bva06g00723 163 PANTHER BNAC02G44440D PROTEIN 1 163 - -
Bva06g00723 163 MobiDBLite consensus disorder prediction 71 85 - -
Bva06g00723 163 SUPERFAMILY beta-beta-alpha zinc fingers 45 75 IPR036236 -
Bva06g00723 163 Gene3D Classic Zinc Finger 29 100 - -
Bva06g00723 163 PANTHER ZINC FINGER PROTEIN JAGGED 1 163 IPR045320 GO:0003700
Bva06g00723 163 MobiDBLite consensus disorder prediction 63 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00723 Bva-Chr6 6860688 6861179 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00723 1 163 C2H2 Transcription Factor Family AT5G57520 53.571 8.50e-32 109
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bva06g00723 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00723 - - pop:18100513 157.532
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00723 06 6860688 6861179 Bva06g00723 06 6860688 6861179 ECH