Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00716 atgaaagagtATTGGACTTCTCTGGCATCACTTTTGGGTGTATTTGCTTTTTGCCAAACTCTCCTTCAAACCGTTTTCCCACCGGAGCTCCGTTTCGCTACCGTCAAGTTCTTCAACCGGATCTTCCACCTGTTCTCCTCGTACTGCTACTTCGACATCACCGAAATCGACGGCGTCAACACCAACGAGCTCTACAACGCTGTTCAGCTCTACTTGAGCTCCTCAGTTTCAATCACCGGCAGCCGCCTCAGCCTCACTCGTGCACTCAACTCCAGCGGCTTTACCTTTGGCCTCGCCAATAATGACAGCATCGTCGACACTTTCAATGGTGTCAATGTGTTGTGGGAACACGTGGTCACACAGAGGCAAGCCCAAACATTTTCATGGCGGCCACTCCCTGATGAGAAGAGAGGCTTCACCCTTCGAATCAAGAAAAAGGACAAagctttgattttgaattcgTACATGGATTACATTATGGAGAAAGCCAATGACATTCGAAGGAAGAATCAAGACCGGCTTTTGTACACTAATTCCCGAGGTGGGTCCTTGGATTCCAGAGGCCATCCTTGGGAATCGGTGCCCTTCAAGCACCCTAGCACATTTGACACATTAGCCATGGACccagagaagaaaaaggagattATGGAAGATCTGCAAGATTTCGCAAATGGGCAAGCCTTTTATCAGAGAAGAGGGCGAGCTTGGAAGAGAGGGTACCTGCTTTATGGGCCACCCGGTACTGGGAAATCCAGCATGATTGCTGCAATGGCTAATTATCTGGGTTACGATATTTATGACCTGGAATTGACTGAGGTGCATAACAATTCAGAGCTGAGGAAGCTTCTGATGAAGACGACCTCCAAGTCCATCATTGTGATTGAGGATATTGACTGTTCAATTAATTTGACGAATAGGAAGAACAATAAGACTGGTTCGAGTAATTATTATGATCCTGTTGCTGCTCCAGAAATACGAGGTGCGTGTGCCTCTGGCGGTGAAGAGGGTGGGAATTCGATAACACTTTCTGGCTTGTTGAATTTCACGGATGGGTTATGGTCATGTTGTGGGAGCGAGAGGATTTTCGTGTTCACCACCAACCACATTGAGAAGCTTGACCCTGCTTTGCTGCGAAGTGGGAGAATGGATATGCACATATACATGAGTTACTGTTCTTTCCCTGCCTTGAAGATTCTGCTTAAGAATTATTTGGGATATGACGAGGGTGACTTGGAGAAATTACTCATGAATGCATTGGAGGGAGTTATTGACAAGGCACAGATGACCCCCGCTGACATTAGCGAGGTTTTGATTAAGAGCAGGCGCCATAAGGAAAGGGCAGTGAATGAATTGTTAGAGACCCTGAAGAGCAGAGCAGAGAggaatgaaaaaaatggaGTTCTGAGGGAGAAAAATGGAGAccaagatgaagatgaagagcaGGAGAAAAGGGCTCTGGAGAGTCCTAAACAAGAGTCTGAGGTTGAGGACAATtgcaaggaagaagaagacgaTGAAGAGAAGATTAATAAGAGAGAGTG 1541 0.4367 MKEYWTSLASLLGVFAFCQTLLQTVFPPELRFATVKFFNRIFHLFSSYCYFDITEIDGVNTNELYNAVQLYLSSSVSITGSRLSLTRALNSSGFTFGLANNDSIVDTFNGVNVLWEHVVTQRQAQTFSWRPLPDEKRGFTLRIKKKDKALILNSYMDYIMEKANDIRRKNQDRLLYTNSRGGSLDSRGHPWESVPFKHPSTFDTLAMDPEKKKEIMEDLQDFANGQAFYQRRGRAWKRGYLLYGPPGTGKSSMIAAMANYLGYDIYDLELTEVHNNSELRKLLMKTTSKSIIVIEDIDCSINLTNRKNNKTGSSNYYDPVAAPEIRGACASGGEEGGNSITLSGLLNFTDGLWSCCGSERIFVFTTNHIEKLDPALLRSGRMDMHIYMSYCSFPALKILLKNYLGYDEGDLEKLLMNALEGVIDKAQMTPADISEVLIKSRRHKERAVNELLETLKSRAERNEKNGVLREKNGDQDEDEEQEKRALESPKQESEVEDNCKEEEDDEEKINKRE 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00716 513 PANTHER BNAC06G41240D PROTEIN 2 496 - -
Bva06g00716 513 CDD AAA 237 390 - -
Bva06g00716 513 Coils Coil 492 512 - -
Bva06g00716 513 MobiDBLite consensus disorder prediction 462 513 - -
Bva06g00716 513 Pfam ATPase family associated with various cellular activities (AAA) 241 389 IPR003959 GO:0005524|GO:0016887
Bva06g00716 513 MobiDBLite consensus disorder prediction 462 496 - -
Bva06g00716 513 Gene3D - 387 462 - -
Bva06g00716 513 Gene3D - 192 386 IPR027417 -
Bva06g00716 513 SMART AAA_5 236 392 IPR003593 -
Bva06g00716 513 PANTHER BCS1 AAA-TYPE ATPASE 2 496 - -
Bva06g00716 513 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 103 455 IPR027417 -
Bva06g00716 513 Pfam Domain associated at C-terminal with AAA 26 118 IPR025753 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00716 Bva-Chr6 6813921 6816068 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00716 211 392 Calmodulin-binding Proteins AT3G56690 25.824 1.16e-08 55.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00716 - - gmx:100794195 843.188
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00716 06 6813921 6816068 Bva06g00716 06 6813921 6816068 ECH