Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00703 ATGTATACGAGCCAGTTCGACGGCAACGCTGCCTTCTCCGGCGGCGGGTTTATGCCCTCTCAGACTAATCAGGGGCCCGACTCGTCCTTCACACCCTCCAGAaaTCGTGATGCGCAGTCATTGCTTCCCTTGACAATCAAGCAGATAAATGATGCAGTTCAGTCAACTGatgataaatcaaatttaattgttgatgGTGTGGAAGTTAACAATGTTACTCTAGTAGGAAGGATGTGTAACAAAGTTGGAAGAATTACTGATATCACTTTTACACTTGATGATGGGACTGGACGGATGGAGTGCAATAAATGGGTTCAAGAATCTGTAGACACAATCGAGGTGGACCGTATCTCgGATGGAACGTATGTACGCCTCCATGGACACTTAAAAGGCTTTCAGGGTAAAAGGACCTTAAATGTTTTCTCTATCAGgcCTGTTACTGACTTCAACGAGATTGATGGCCATTTCATTGATTGTATATATGTCCATCTTTACAATACTAAGTTACGgAGTGGTATCCCTAATCAGCAAAATATGACCAATCCCATGTCTGCTACTCCCACAAAGGGCTATCAGGCTATGCCACCAAATCTAtTTTCTGCTCAATATAACAATGGTCAGAAAAGTGTTGAAGATATGGTCTTAGAAGTCTTGCATCTTCCCGCAAACAGGGCAAGGGAGGAGGGAGTTCCTCGTGAACTTATTGCAAAGCACCTTGGAATTCCTTTGGATAAGCTCATGTTAGCCATTAAAAATCTTATCGAGGAAGGTGCCATTTATGAAGCCATAGGTGATCATTACAAGTCAATTATCAATGGTTG 821 0.4153 MYTSQFDGNAAFSGGGFMPSQTNQGPDSSFTPSRNRDAQSLLPLTIKQINDAVQSTDDKSNLIVDGVEVNNVTLVGRMCNKVGRITDITFTLDDGTGRMECNKWVQESVDTIEVDRISDGTYVRLHGHLKGFQGKRTLNVFSIRPVTDFNEIDGHFIDCIYVHLYNTKLRSGIPNQQNMTNPMSATPTKGYQAMPPNLFSAQYNNGQKSVEDMVLEVLHLPANRAREEGVPRELIAKHLGIPLDKLMLAIKNLIEEGAIYEAIGDHYKSIING 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00703 273 CDD RPA2_DBD_D 71 164 - -
Bva06g00703 273 Gene3D - 202 271 IPR036388 -
Bva06g00703 273 PANTHER REPLICATION PROTEIN A-RELATED 2 269 IPR040260 -
Bva06g00703 273 Gene3D - 37 169 IPR012340 -
Bva06g00703 273 PIRSF RPA32 1 271 IPR014646 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Bva06g00703 273 SUPERFAMILY "Winged helix" DNA-binding domain 205 269 IPR036390 -
Bva06g00703 273 Pfam OB-fold nucleic acid binding domain 72 145 IPR004365 GO:0003676
Bva06g00703 273 SUPERFAMILY Nucleic acid-binding proteins 41 168 IPR012340 -
Bva06g00703 273 PANTHER REPLICATION PROTEIN A 32 KDA SUBUNIT A 2 269 - -
Bva06g00703 273 Pfam Replication protein A C terminal 163 265 IPR014892 -
Bva06g00703 273 MobiDBLite consensus disorder prediction 13 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00703 Bva-Chr6 6755795 6759722 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00703 3 270 Core DNA Replication Machinery Family AT2G24490 43.478 1.30e-77 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00703 K10739 - gmx:100782819 395.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00703 06 6755795 6759722 Bva06g00703 06 6755795 6759722 ECH