Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00701 ATGGCTTCGGATTCATCTTTAGAGGGTCTCATGCTTGATCCTTCTAAGTGCAGTAAGCTGAGTATggaggaaaaaagagaactTGTTTATGAAATTTCTAAGTGGTCACATGGTGCACCAGAGATGCTACAGTCCTGGAGCCGTCAAGAGATTTTGCAGATCCTTTGTGCagaaatgggaaaagaaaggaagtaCACTGGGTTgacaaagttaaaaattatagaaaaccTTCTAAAAATTGTTTCTGAAAAGAAATCAGGAGGCACTGAAACTTCAACAGACCTTGAGCCAAATACTTCTTCTGGACACGGCCAGAAACCTACAAAAAGGCAGAGAAAAACTGAGAATCCATGTCGATTATCTGTTCCAGCAAACAATGTTTCAGTCGCAAATGGTGGTGATGTCAGTGGCACCACATACTGCAAAAACACAGCGTGCAAAGCTACTCTGAGTCCTGCTGATGAATTTTGCAAAAGATGTTCATGCTGCATTTGTCATCAATATGATGACAATAAAGATCCTAGTTTGTGGTTAATATGTAGCTCTGAGCCTCCATTTGTTGGTGATTCATGTGGCTTGTCATGCCATCTTGAGTGTGCTTTAAAACATCATAGTTCTGGCATTGCCAAAGATGGAGAATGTCCCAAGCTTGATGGAGAGTTCTACTGTGTCTCCTGTGGTAAAGTGAATGATTTGCTCGGATGCTGGAGAAAACAACTGATGCTGGCAAAAGATACCAGACGTGTGGACATACTCTGCTATCGTGTCTCCTTAAGCCAAAGACTTTTACAAGGGACCAAAAAGTATCAAAAACTTCATGAAATTGTGGATGAGGCGGTGAAGAAACTTGAACCTGAAGTAGGTCCATTGACTGGATCACCTGTGAAGATTGGTAGGGGAATTGTGAATAGACTTTCATCGGGACCAGAGGTTCAGAAACTCTGCGGTTTAGCTTTGGAATCACTGGATTCATTGCTTTCTGAAAGGATCTTTCATCCATCATCCAATCCAACTATTCAAGaaacaaatttggTTGCTTCAATTATGGTGAGATTTGAAGATGTCGCTGCAACATCCGTCACTGTGATTTTGGGTTCTGAAGATCCATCCGGGGAAGGTATTATTGGTTATACTTTGTGGCACCGCAAAGCTCATGATATAGATTATCCGGTGGAACCAACTTGCACTTTGCTTCTACCAAATAAAAGATTCAGCATCAGGGGTCTAATTCCATCTACAAAATACAGTTTCAAAGTTGTTTCATTCAGCGATTCAAGGGAGTTGGGTATGCGTGAAGTTCACTTCTCAACAGAGCATGGCGAGGATGAAGTCCCAAACTGTTCAGCAACAGAAAGAAGTCAGAGCCCAGTGACCAATTGCAGCAGCCTTTCCAATCCTTCTTCAGTTGAGGACGAAACTAACAACAGTAATCCATATAGTGACCAGACAAATAATCGAGCAGAGAGTTATCTTGCATACAACAAGAACACTGACAAGCATGCTTCTGGAAATTTATCCCATGATGCTATTGATAGTTCCAACATAGGTGGAGGGGTACTTAGACTTCCAGCTGATGCAGATTCTTTGTCAGACAAGCAGCATACCATTGGAATTTCCAGCTCTTTACCTAGTTCCATAGTGCTAAACCTTGAAAATAAGCAATTGCCAGATGAACAAGTCATTGAGGACATAAGCACCGATGATGGGATGAATTCCGCAGTTCAGACTGGGAGGGAATGTCTGCCATTTCCAGGTAGCTCAGATGCAGGCTTACCTATTACACCCTGCAAGTTGGATATACTTAAGGATGGACCAGGGAGAAATGGGAGATTTAAGTCCAACGGCAAGGATCAGGAAAATGGGTCTGGGAAAAGAGAGGGCCCTCAGGATGGCAGCACATCTAAGAAGAGAAGTGGGGAAAGGCAAGATGAGGGTTGTGCTGCCAATGCGTTTTCTGATCAAGATTTTGAGTATTATGTGAAGGTGATTAGACAGCTAGAATGTGAAGGGCATATCGAAAAGAACTTCAGGCAGAAATTTCTGACTTGGTACAGCTTGAGAGCAACACCACAAGAAGTAAGGGTCGTAAAAGTTTACATTGATACATTTCTTGATGATCGAGCATCTCTGGCAGAGCAGCTTGTGGACACGTTCTCAGAATGCATATCAAGCAAAAGACAATCTACGGTGCCGGCTGGGTTCTGCATGAAGCTCTGGCATTA 2222 0.4145 MASDSSLEGLMLDPSKCSKLSMEEKRELVYEISKWSHGAPEMLQSWSRQEILQILCAEMGKERKYTGLTKLKIIENLLKIVSEKKSGGTETSTDLEPNTSSGHGQKPTKRQRKTENPCRLSVPANNVSVANGGDVSGTTYCKNTACKATLSPADEFCKRCSCCICHQYDDNKDPSLWLICSSEPPFVGDSCGLSCHLECALKHHSSGIAKDGECPKLDGEFYCVSCGKVNDLLGCWRKQLMLAKDTRRVDILCYRVSLSQRLLQGTKKYQKLHEIVDEAVKKLEPEVGPLTGSPVKIGRGIVNRLSSGPEVQKLCGLALESLDSLLSERIFHPSSNPTIQETNLVASIMVRFEDVAATSVTVILGSEDPSGEGIIGYTLWHRKAHDIDYPVEPTCTLLLPNKRFSIRGLIPSTKYSFKVVSFSDSRELGMREVHFSTEHGEDEVPNCSATERSQSPVTNCSSLSNPSSVEDETNNSNPYSDQTNNRAESYLAYNKNTDKHASGNLSHDAIDSSNIGGGVLRLPADADSLSDKQHTIGISSSLPSSIVLNLENKQLPDEQVIEDISTDDGMNSAVQTGRECLPFPGSSDAGLPITPCKLDILKDGPGRNGRFKSNGKDQENGSGKREGPQDGSTSKKRSGERQDEGCAANAFSDQDFEYYVKVIRQLECEGHIEKNFRQKFLTWYSLRATPQEVRVVKVYIDTFLDDRASLAEQLVDTFSECISSKRQSTVPAGFCMKLWH 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00701 740 CDD FN3 350 424 IPR003961 GO:0005515
Bva06g00701 740 MobiDBLite consensus disorder prediction 85 117 - -
Bva06g00701 740 MobiDBLite consensus disorder prediction 447 484 - -
Bva06g00701 740 MobiDBLite consensus disorder prediction 603 643 - -
Bva06g00701 740 SUPERFAMILY Fibronectin type III 350 424 IPR036116 GO:0005515
Bva06g00701 740 MobiDBLite consensus disorder prediction 436 484 - -
Bva06g00701 740 MobiDBLite consensus disorder prediction 603 645 - -
Bva06g00701 740 MobiDBLite consensus disorder prediction 85 105 - -
Bva06g00701 740 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 740 - -
Bva06g00701 740 CDD PHD_VIN3_plant 161 226 - -
Bva06g00701 740 Pfam PHD - plant homeodomain finger protein 141 260 IPR032881 -
Bva06g00701 740 Gene3D Immunoglobulins 331 429 IPR013783 -
Bva06g00701 740 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 740 IPR044514 GO:0010048|GO:0040029
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00701 Bva-Chr6 6731084 6736366 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00701 4 621 PHD Gene Family AT4G30200 47.706 1.78e-177 520
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00701 - - gmx:100794721 1168.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00701 06 6731084 6736366 Bva06g00701 06 6731084 6736366 ECH