Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00698 ATGAAGTATATTCGAACGAACAGCTTGAAGAGGCTTTTCTCTTTGAGAAGACGCAGTTTCGGTGAAGATATTTTGAGCTCGAGTGGTTCTCCTGGCAAAGAAAACGAAGAGAATTTCGAGGATGTTCATCTTGCGGAACGTCCACGAAGACCCACTTGGAAATGCTTCTCTTTTGAAGAACTATATGATGCCACCAATGGCTTCAGCCCAGAGAATCTGATTGGAAAAGGAGGGTACGCAGAGGTATACAAGGGAAAATTCATAGATGGTGAAGAATTTGCAGTGAAAAGGCTCACAAAAACTTCCTGCgatgaaaggaaagagaaggaaTTTTTGACGGAGATTGGTACAATTGGTCATGTTCGCCATTCAAATGTATTGCCCCTTCTGGGTTGTTGTATTGACAATGGACTTTACCTTGTCTTTGAGCTATCATCCAGAGGCTCTGTTGCGTCTCTTCTTCATGACGAGACTTTGCCCCCAATGGATTGGAAAACAAGGCACAAGATAGCTCTTGGCACTGCTCGTGGCCTCCATTACTTGCACAAGGGCTGCCAGAGAAGGATAATTCACAGGGACATCAAGGcctcaaatattcttttaactgCAGATTTTGAACCACAgATATCTGATTTCGGATTAGCCAAATGGCTTCCTTCACAATGGACTCACCATTCAATTGCCCCAATTGAAGGGACATTTGGGCATTTGGCCCCCGAGTACTATATGCACGGAATAGTGGATGAGAAAACAGACGTTTTTGCCTTCGGCGTGTTCTTGCTTGAACTCATATCTGGGAGAAAACCTGTGGATGGCTCTCACCAAAGCTTACACAACTGGGCAAAACCAATATTGAATAAAGGGGAAATAGAGAAACTGGTAGATCCAACTCTTGGAGAGGCCTATGATGTAACACAGTTACAAAGACTTGCTTTTGCAGCCTCTCTTTGCATCAGGGCATCTTCAGTATGGCGACCCACCATGAGTGAGGTATTAGAGGTAATGGAGCTGGAAGGGGAGATGGATAGAGAGAAATGGAAAATGCcaggggaagaagaagagcaCGAAGATGAGTTCTGGGGTTTTGAGGATTTGGAATGTGAATATGACAGCACCTTCTCAATGTCACTGCCTGATTCCATTGGAAGTACTTCTTG 1157 0.4209 MKYIRTNSLKRLFSLRRRSFGEDILSSSGSPGKENEENFEDVHLAERPRRPTWKCFSFEELYDATNGFSPENLIGKGGYAEVYKGKFIDGEEFAVKRLTKTSCDERKEKEFLTEIGTIGHVRHSNVLPLLGCCIDNGLYLVFELSSRGSVASLLHDETLPPMDWKTRHKIALGTARGLHYLHKGCQRRIIHRDIKASNILLTADFEPQISDFGLAKWLPSQWTHHSIAPIEGTFGHLAPEYYMHGIVDEKTDVFAFGVFLLELISGRKPVDGSHQSLHNWAKPILNKGEIEKLVDPTLGEAYDVTQLQRLAFAASLCIRASSVWRPTMSEVLEVMELEGEMDREKWKMPGEEEEHEDEFWGFEDLECEYDSTFSMSLPDSIGSTS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00698 385 SMART serkin_6 68 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00698 385 Pfam Protein kinase domain 71 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00698 385 ProSiteProfiles Protein kinase domain profile. 68 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00698 385 ProSitePatterns Serine/Threonine protein kinases active-site signature. 189 201 IPR008271 GO:0004672|GO:0006468
Bva06g00698 385 PANTHER OS08G0249100 PROTEIN 16 367 - -
Bva06g00698 385 Gene3D Transferase(Phosphotransferase) domain 1 146 356 - -
Bva06g00698 385 ProSitePatterns Protein kinases ATP-binding region signature. 74 96 IPR017441 GO:0005524
Bva06g00698 385 CDD STKc_IRAK 74 336 - -
Bva06g00698 385 Gene3D Phosphorylase Kinase; domain 1 40 144 - -
Bva06g00698 385 PANTHER OS04G0654600 PROTEIN 16 367 - -
Bva06g00698 385 SUPERFAMILY Protein kinase-like (PK-like) 50 336 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00698 Bva-Chr6 6720555 6723782 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00698 33 343 Receptor kinase-like Gene Family AT1G60800 42.991 1.77e-73 237
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva06g00698 Pkinase 5.7e-40 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00698 - - gmx:100819499 619.002
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00955 05 4828229 4831890 Bva06g00698 06 6720555 6723782 BWGD
Bva06g00698 06 6720555 6723782 Bva06g00698 06 6720555 6723782 ECH