Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00695 ATGGAGTGGGACAGCAATTCGGATCTGAGCGGGGACGAAGACGAAACCTTTATGCTCAACGATGGTGGCCCTCTTCCTTTTCCCGTTGAGGATTTGCTCCAAACGGCTCCATGTGGGTTCGTCGTCACTGATGCTCTCGAGCCGGACCATCCAATTATATATGTCAACACTGTCTTTGAGATGCTCACTGGGTATAGGGCAGAGGAAGTGCTTGGTCGCAATTGCCGTTTCTTGCAATGCCGAGGACCTTTTGCTAAGAGAAGGCACCCATTGGTGGACTCAACTGTAGTTTCAGAAATTAGGGGATGCCTTGAGGAGGGAATTGAATTCCAAGGTGAGTTGCTGAACTTTAGGAAAGATGGATCTCCACTGATGAACAGATTGCGGCTGACACCTATATATGGAGATGATGAGACTATAACACATGTCATTGGAATCCAGTTCTTCACAGAGGCAAACATTGATCTTGGTCCTGTACCTGGTTCAACAATTAAGGAATCTACTAAATCATCTGATCGCTTTCGTTCTGTTCTTTCCTCATTGCGCTCACTTCCAGTGGGGGATCGGAATGTATCTCGTGGGGTTTGTGGGATATTGCAATTGAGTGATGAGGTAATATCTCTCAAAATACTTGCCCGCTTAACTCCTAGAGATATTGCATCGGTTGGCTCTGTCTGTAGACAATTGTACGAGCtaacaaaaaatgaagacCTCTGGAGGATGGTTTGCCAAAATGCATGGGGCAGTGAGACTACACGAGTTTTAGAGACTGTGCCCGGTGCAAGGAGACTTGGATGGGGTCGACTGGCTAGGGAGTTGACCACTCTTGAAGCAGCAGCATGGAGTAAGCTGACTGTTGGAGGTGCTGTTGAACCTTCACGTTGTAATTTTAGTGCTTGTGCAGTTGGTAATAGAGTTGTTCTTTTTGGTGGTGAAGGGGTTGACATGCAACCTATGAACGATACCTTTGTATTGGATCTCAATTCTAGTAATCCTGAGTGGCAACACGTCCAGGGCTTGCTCAACGATGTCTTTGTGCTGGACCTGGATGCAAAACCTCCAACTTGGCGTGAAATTTCTGGGTTGGCACCTCCGCTTCCTAGATCATGGCACAGCTCCTGCACTCTCGATGGTACTAAGCTGATAGTTTCTGGTGGCTGTGCTGATTCTGGAGTACTCTTGAGTGACACTTTCCTCCTTGATCTGTCAATGGAGAAACCTGTCTGGAGAGAGATACCAGTGCAATGGACTCCACCATCTCGTCTGGGCCACACACTGTCTGTTTATGGTGGTAGAAAAATACTGATGTTTGGGGGTCTGGCCAAGAGTGGGCCCCTGCGGTTTCGTTCTAGCGACGTATTCACGATGGATTTAAGTGAGGAGGAACCATGTTGGAGATGTGTAACTGGAAGTGGAATGCCTGGTGCTGGGAATCCCGGGGGCGTAGCTCCTCCGCCTAGACTTGATCACGTGGCCGTTAGTCTTCCAGGTGGTAGAATCCTGATCTTTGGTGGGTCTGTTGCAGGTCTTCACTCGGCCTCCCAGCTTTACATTCTGGATCCTACAGATGAAAAGCCTACGTGGAGAATTCTAAATGTACCTGGGAGGCCTCCGAGATTTGCTTGGGGACATAGTACATGTGTTGTTGGAGGTACAAGAGCCATAGTACTGGGTGGCCAAACAGGAGAGGAATGGATGCTAAGTGAGCTCCATGAGCTATCTCTGGCAAGTTCTGTGATCTA 1742 0.4799 MEWDSNSDLSGDEDETFMLNDGGPLPFPVEDLLQTAPCGFVVTDALEPDHPIIYVNTVFEMLTGYRAEEVLGRNCRFLQCRGPFAKRRHPLVDSTVVSEIRGCLEEGIEFQGELLNFRKDGSPLMNRLRLTPIYGDDETITHVIGIQFFTEANIDLGPVPGSTIKESTKSSDRFRSVLSSLRSLPVGDRNVSRGVCGILQLSDEVISLKILARLTPRDIASVGSVCRQLYELTKNEDLWRMVCQNAWGSETTRVLETVPGARRLGWGRLARELTTLEAAAWSKLTVGGAVEPSRCNFSACAVGNRVVLFGGEGVDMQPMNDTFVLDLNSSNPEWQHVQGLLNDVFVLDLDAKPPTWREISGLAPPLPRSWHSSCTLDGTKLIVSGGCADSGVLLSDTFLLDLSMEKPVWREIPVQWTPPSRLGHTLSVYGGRKILMFGGLAKSGPLRFRSSDVFTMDLSEEEPCWRCVTGSGMPGAGNPGGVAPPPRLDHVAVSLPGGRILIFGGSVAGLHSASQLYILDPTDEKPTWRILNVPGRPPRFAWGHSTCVVGGTRAIVLGGQTGEEWMLSELHELSLASSVI 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00695 580 Gene3D PAS domain 22 158 - -
Bva06g00695 580 CDD PAS 36 146 IPR000014 -
Bva06g00695 580 SUPERFAMILY F-box domain 189 259 IPR036047 GO:0005515
Bva06g00695 580 Pfam PAS domain 37 147 IPR000014 -
Bva06g00695 580 Gene3D - 194 242 - -
Bva06g00695 580 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 338 579 - -
Bva06g00695 580 PANTHER ADAGIO PROTEIN 1-LIKE 338 579 - -
Bva06g00695 580 ProSiteProfiles PAS repeat profile. 29 107 IPR000014 -
Bva06g00695 580 TIGRFAM sensory_box: PAS domain S-box protein 33 146 IPR000014 -
Bva06g00695 580 SUPERFAMILY PYP-like sensor domain (PAS domain) 36 147 IPR035965 -
Bva06g00695 580 PANTHER BACTERIOOPSIN TRANSCRIPTIONAL ACTIVATOR 1 338 - -
Bva06g00695 580 Pfam F-box-like 206 244 IPR001810 GO:0005515
Bva06g00695 580 PANTHER ADAGIO PROTEIN 1-LIKE 1 338 - -
Bva06g00695 580 SUPERFAMILY Kelch motif 280 574 IPR015915 GO:0005515
Bva06g00695 580 Gene3D - 338 472 IPR015915 GO:0005515
Bva06g00695 580 Gene3D - 271 337 IPR015915 GO:0005515
Bva06g00695 580 Pfam Galactose oxidase, central domain 367 404 - -
Bva06g00695 580 Pfam Galactose oxidase, central domain 294 335 - -
Bva06g00695 580 Pfam Kelch motif 421 472 IPR011498 GO:0005515
Bva06g00695 580 Pfam Kelch motif 488 535 IPR011498 GO:0005515
Bva06g00695 580 Gene3D - 478 579 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00695 Bva-Chr6 6701526 6706737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00695 33 148 AGC Kinase Gene Family AT5G58140 34.483 5.57e-15 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00695 K12115 - tcc:18589282 1075.08
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00695 06 6701526 6706737 Bva06g00695 06 6701526 6706737 ECH