Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00682 ATGCACGCCTTGATCGAACAGATGGCTCGTCTTTTTCTCTGCGGTTGCACCCTACTCCTTTGTATTGGCTTCGCAATATCAGCTGAACAATCAACTGAAATTTTGGGTGGATCTGATATTAAGAACCATACGAATTGCTTTCAGCCACCGCCATCGTCTTCTCCGCCGTCACCCCCAGAACAAACCTGCAATGTGGGGATAGGGCTATGTAGCTTCCAATCAAAGATGACAGTAACATTCAAAGGCTCTTCCACGGTGAAGCCAATAGAGCCCACGTGGATAGGTCACTCACCTTTATCAGAATGGGATCAAATAGGCACGATAACTCACGTGCCCACCATCTACTTCTACAAACCCCCGTACAATTTGCTCTCGCCCGACGCTGATATTGCCACGACTCTCAAAGACTCACTAAGCCGAGTGTTGGTGCCGTTTTATCCATTAGCTGGTCGTTTGAAGTGGATAGGCAACGGACGACTTCAACTCGATTGCAACGCAAAGGGGGTTGACTTCGTTGAAGCCGAGtctgattttaatttagaCGACTTTGGTGAGTTCTCTCCTTCTCCTGAATACCACTACCTTATCCCATTTGTGGACTATAGCCTCCCGATTCAGGAGCTGCCTTTGGTACTTGTCCAGTTGACCAGATTCAAATGTGGTGGAATCAGTGTTAGCTTAACAATTTCGCATGCTGTTGTTGATGGACCAAGTGCCCTGCACTTCATCTCTGAATGGGCAAGGCTTGCACGAGGGGAGCCTCTAGAAACGATGCCGTTTCTCGACCGGACATTGCTCCGTGCCGGGGAACCTCCTGCGGCGCCACCGTGCATCGATCACTCTGAGTTCAGCCATCCGCCACTGTTACTCGGCCAGAGTGATAATagagaggaaaggaaaaagaagaccACCGTTGCAATGTTAAGGCTAAGCAAAACCCAAGTTGACAAGTTGAGAAAGATAGCTGACGAGAGCTGGGAAAGGCCTAAAGGGCGTGGCTATACCCGGTACGAGACGGTAACTGGCCATATATGGAGAGGTGCTTGCAAGGCAAGGGGACACAAACACGAGCAACCAACTGCTTTAGGTGTTTGTGTTGACTCAAGGAATCGCATGCAGCCTCCATTGCCGAAAGGGTACTTCGGCAATGCAACCTTGGATGTGATCGCTACCAGTTCTTCGGGTGAATTGATATCAAAGCCGTTAGGCTATGCAGCAAGTAGAATAAGGTCAGCCATTGAGAAGGTGACGGATGAGTACGTGAGGTCAGGGATTGATTTCTTGAAGAACCAAGAGGATTTGACCAAGTTTCAAGACCTTCATGCACTGGGGAGTGATGGAGGGCCTTTCTATGGGAACCCGAATCTTGGTGTGGTTAGTTGGTTGACTTTGCCAATTTATGGGTTTGACTTTGGATGGGGGAAGGAATTTTACATGGGACCAGGGACACATGACTTTGATGGAGACTCTTTGATCCTTCCTAATCCTAACGGGGATGGTTCGTTATCTGTTGCTCTGTGTCTCCAAGTGGCTCATATGGATGCATTCAAGAGGTACTTTTATGAAGACATTACTGCGTGGTA 1583 0.475 MHALIEQMARLFLCGCTLLLCIGFAISAEQSTEILGGSDIKNHTNCFQPPPSSSPPSPPEQTCNVGIGLCSFQSKMTVTFKGSSTVKPIEPTWIGHSPLSEWDQIGTITHVPTIYFYKPPYNLLSPDADIATTLKDSLSRVLVPFYPLAGRLKWIGNGRLQLDCNAKGVDFVEAESDFNLDDFGEFSPSPEYHYLIPFVDYSLPIQELPLVLVQLTRFKCGGISVSLTISHAVVDGPSALHFISEWARLARGEPLETMPFLDRTLLRAGEPPAAPPCIDHSEFSHPPLLLGQSDNREERKKKTTVAMLRLSKTQVDKLRKIADESWERPKGRGYTRYETVTGHIWRGACKARGHKHEQPTALGVCVDSRNRMQPPLPKGYFGNATLDVIATSSSGELISKPLGYAASRIRSAIEKVTDEYVRSGIDFLKNQEDLTKFQDLHALGSDGGPFYGNPNLGVVSWLTLPIYGFDFGWGKEFYMGPGTHDFDGDSLILPNPNGDGSLSVALCLQVAHMDAFKRYFYEDITAW 527
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00682 527 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 80 524 - -
Bva06g00682 527 Gene3D - 72 285 IPR023213 -
Bva06g00682 527 Pfam Transferase family 76 522 - -
Bva06g00682 527 PANTHER SPERMIDINE HYDROXYCINNAMOYL TRANSFERASE 80 524 - -
Bva06g00682 527 Gene3D - 292 523 IPR023213 -
Bva06g00682 527 SUPERFAMILY CoA-dependent acyltransferases 132 255 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00682 Bva-Chr6 6605361 6607486 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00682 76 522 Monolignol Biosynthesis Gene Families AT5G48930 40.535 2.28e-115 346
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00682 K13065 - fve:101295724 688.337
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00682 06 6605361 6607486 Bva06g00682 06 6605361 6607486 ECH