Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00674 ATGGCTACTTCTCAGATAGAAAAAAACAAGACAGTTAAGAAGAAGTTGCAGAAGAGCTACTTCGATGTGCTGGGCTTGTGCTGCTCCTCCGAGGTTCCTCTCATCGAAAACATCCTGAAACCTCTTGACGGAGTGAAAGAGGTTTCTGTGATTGTTCCTTCGAGAACTGTTATCGTTGTCCACGACAGTATGGTCATTTCACAAATTCAGATTGTCAAGGCTCTGAATCAAGCAAGGCTGGAAGCAAATATCAGAATGCATGGGGGTGAAAAGcagcaaaagaaatggccGAGCCCGTATGCAATGGCATctggtctttttcttttactttcattCTTAAAGTATGTGTACCGTCCCTTGGAGTATCTGGCCCTCGGAGCTGTTGCTGCCGGTGTCTTTCCAATGCTATTAAAAGCCATTGTCTCTGTTCGGAACCTTAGGATTGATATCAACATTCTCATGATCATTGCAGTCATCGGAACAATTTCAATGGATGATTATTTGGAAGCCGGCAcaattgtttttctcttctcaattgCAGAATGGCTAGAGTCAAGGGCAAGCTATAAGGCAAGTGCAGTGATGTCTTCGTTGATGAACATAGCTCCACAGAAAGCTGTGTTAGCAGAAACAGGGGAAGTTGTGGACGCTGATGAGGTAAAGATGAACACCATCCTCGCCATTAAAGCAGGCGAAGTCATACCCATTGATGGAATCGTTGTTGAAGGAAACTGCGAAGTGGATGAGAAGACATTGACTGGTGAATCATTCCCGGTACCCAAACACAAAGACTCTACTGTATGGGCTGGCACCATCAATTTGAACGGTTATATAAGCGTGAAAACTACTGCACTAGCTGAGGATTGTGTGGTGGCTAAAATGACCAAGCTAGTGGAAGAAGCTCAAAACAGCAAAACCAACACTCAGAGATTGATTGACAAGTTTGCCAAGTTCTACACACCAGCTGTTGTAGTTATAGCAGCTTTTGTAGCTGTGGTTCCGGTTGTTCTAAGAGTACATAATCGGAGACATTGGTTCCACTTTGCACTGGTTGTTTTGGTGAGTGCCTGCCCATGTGCACTTATCCTTTCTACGCCTGTTGCAACTTTCTGTGCTTATACGAAAGCAGCAACTTCCAGCCTTCTCATCAAAGGGGGTGAATATCTTGAAACACTTGGGAAAATCAAGATCATGGCTTTTGACAAAACTGGTACTATAACAAAGGGTGAATTTGTGGTGACAAATTTCCAATCTCTTTGTGACGATATTAATTTGGACACATTGGTTTATTGGGTCTCGAGCATTGAGAGCAAGTCAAGTCATCCAATGGCTGCGGCTATTGTTGACTATGGAAGGTCACTCTCTATAGAACCAAAGCCAGAAAAGGTGACcgcatttgaaaattttcctgGAGAAGGCATCCATGGTATAATAGACGAGAGAGATGTTTATATTGGAAATAAGAGAATTTCCATGAGAGCTGGGTCTGAAACAGTTCCAACCTTAGAAGGCAATAGTCGGGGGGGAAAGACTGCTGGCTACATATACTCTGGAGCAACCCTCATCGGATTTTTCTGTCTTGCGGATGCTTGCCGGTCAGGGGTTCAGGAGGCAATAGGACAGCTGAAGTTATTGGGAATCAAAACTGCTATGCTCACAGGAGATAGTCAAGCAGCTGCCCTGCAAGCGCAAGAGCAGTTAGGGCATGCTCTGGAGCTAGTCCATGCAGAACTTTTACCAGAAGGCAAAGTAAAAATCATCACGGAATTCAAAAAGGAAGGGCCCACAGCTATGGTTGGAGATGGTATAAATGATGCACCTGCATTAGCTAGCGCTGATATTGGTATCTCAATGGGCATTTCCGGTTCTGCACTAGCAAGTGAGACGGGCAATATAATTCTGATGTCGAATGACATCAGGAAGATACCACAAGCCATCAAGCTTGCAAGAAAATCTCATAAGAAAGTAATAGAGAATGTTATTCTATCAGTCACTACTAAGGCTGTAATTCTTGGCTTGGCTTTTGCTGGCTATCCACTTGTTTGGGCGGCAGTTCTTGCTGATGTTGGAACATGCTTGTTGGTCATCTTAAACAGCATGATGCTTTTGCGTGGAGGAAATAGACATGGCGGAAAATGTTGTAGATCTTCCACTCAACAGCATTTCCATAAAAATGGATGTGAGACTACTAGTGGCAAGTCCTCTCATCATCAACATCCGCATTGTTGCTCAGACAAGATGAAGGAGGTTTCTCAGCCTGAGAAGTGTTCATCCCCCAATTGTGCCTCAAAGTATCAGTCTAGACCTACAAATGCAAGCTTAGGTGGAAACGCTGAGCACATTAATACTATTGAGGCTCATGGTACATGTAAGGGCAGTGATGAATTCCATCAACATCAGTGTCAACATGATAGCCATCAGCATCAGCACCAACATCATAACCATCAGCATTGTTGCTCAAATGAGATAAAGATGGTATCTCAGCCTGAGAAACGTGCATCCTCCAAGTGTGCCTCAAAGTGCCAGTCTAGCCCTACAAATGGAAGCTTAGGTGAGAACACTAAGCACATTACCATCGAGGCTCATGGTAAATGTGGGGGCAGTGATAAATTCCATGAACCAAAGCATTGTCATTATGGAAGATGCGACAAGAGTACACATGGAGTTCTGTCACACAATATGGAGAACCACATTTTTTCAAACGACAGTCTGATTGTGGCTGCAGAAGATAAATCTCCCAATTCAATACACAGTCACGATATTTGTTTGGAAGATAACAAGCACCATGGGACAGGACACTGCCGCGACAGAAATTGTGACATATTTACTCATGATAGAGAGTCTGGTAGTGATCCTTGTCATTTTaaactttcttctttaaaagaaGATGAGGATTGTAGTAATAAACATTGCCACTTGATCTATGGTTGTGAAAACCGTAGAATTCAAGAATGTGGAAAGATGTTAGGATCCTGTCATGATATTCACCATCAAAATCCGGAGTCTCATTCTGATTGTAAGAAACTTGGGGCAGATTACACATCCATTGACATTATTTCAGAAAATGAGCATGTTGAATCAGCCTtggaagagaaggaaaaaggtTCCTGCTGCAAAGGCCGTTCAGACCAATTGACGAAATTCCCTCCTAAGCGTTCCTGTGCGGGTTCAAATGACAGAGAAGTTGGTGCATGTTGCGGTAGTGAGGGCTGTTCCAAAGAATCCATGGAACTTTCCTTTGTGCATGCTTGTATGAGTTTAGACAAGAGAGAAATTGGTGGGTGTTGCAAGAGCTATATGAAGGAATGCTGTGGAAAGGTTGGACATTGTCATTTGCGGGCTGGTTTTGGGGGAGGCTTATCAGAAATTGTTACAGAATA 3380 0.4201 MATSQIEKNKTVKKKLQKSYFDVLGLCCSSEVPLIENILKPLDGVKEVSVIVPSRTVIVVHDSMVISQIQIVKALNQARLEANIRMHGGEKQQKKWPSPYAMASGLFLLLSFLKYVYRPLEYLALGAVAAGVFPMLLKAIVSVRNLRIDINILMIIAVIGTISMDDYLEAGTIVFLFSIAEWLESRASYKASAVMSSLMNIAPQKAVLAETGEVVDADEVKMNTILAIKAGEVIPIDGIVVEGNCEVDEKTLTGESFPVPKHKDSTVWAGTINLNGYISVKTTALAEDCVVAKMTKLVEEAQNSKTNTQRLIDKFAKFYTPAVVVIAAFVAVVPVVLRVHNRRHWFHFALVVLVSACPCALILSTPVATFCAYTKAATSSLLIKGGEYLETLGKIKIMAFDKTGTITKGEFVVTNFQSLCDDINLDTLVYWVSSIESKSSHPMAAAIVDYGRSLSIEPKPEKVTAFENFPGEGIHGIIDERDVYIGNKRISMRAGSETVPTLEGNSRGGKTAGYIYSGATLIGFFCLADACRSGVQEAIGQLKLLGIKTAMLTGDSQAAALQAQEQLGHALELVHAELLPEGKVKIITEFKKEGPTAMVGDGINDAPALASADIGISMGISGSALASETGNIILMSNDIRKIPQAIKLARKSHKKVIENVILSVTTKAVILGLAFAGYPLVWAAVLADVGTCLLVILNSMMLLRGGNRHGGKCCRSSTQQHFHKNGCETTSGKSSHHQHPHCCSDKMKEVSQPEKCSSPNCASKYQSRPTNASLGGNAEHINTIEAHGTCKGSDEFHQHQCQHDSHQHQHQHHNHQHCCSNEIKMVSQPEKRASSKCASKCQSSPTNGSLGENTKHITIEAHGKCGGSDKFHEPKHCHYGRCDKSTHGVLSHNMENHIFSNDSLIVAAEDKSPNSIHSHDICLEDNKHHGTGHCRDRNCDIFTHDRESGSDPCHFKLSSLKEDEDCSNKHCHLIYGCENRRIQECGKMLGSCHDIHHQNPESHSDCKKLGADYTSIDIISENEHVESALEEKEKGSCCKGRSDQLTKFPPKRSCAGSNDREVGACCGSEGCSKESMELSFVHACMSLDKREIGGCCKSYMKECCGKVGHCHLRAGFGGGLSEIVTE 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00674 1126 Pfam E1-E2 ATPase 209 377 - -
Bva06g00674 1126 Gene3D - 390 650 IPR023214 -
Bva06g00674 1126 SUPERFAMILY Calcium ATPase, transduction domain A 213 298 IPR008250 -
Bva06g00674 1126 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 7 719 - -
Bva06g00674 1126 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 150 702 IPR027256 GO:0006812|GO:0016021|GO:0019829
Bva06g00674 1126 Gene3D - 410 531 IPR023299 GO:0000166
Bva06g00674 1126 PRINTS H+-transporting ATPase (proton pump) signature 631 656 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00674 1126 PRINTS H+-transporting ATPase (proton pump) signature 599 615 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00674 1126 SUPERFAMILY HAD-like 399 700 IPR036412 -
Bva06g00674 1126 Pfam haloacid dehalogenase-like hydrolase 395 613 - -
Bva06g00674 1126 Gene3D - 187 302 - -
Bva06g00674 1126 CDD P-type_ATPase_HM 123 700 - -
Bva06g00674 1126 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 7 719 - -
Bva06g00674 1126 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Bva06g00674 1126 PRINTS P-type cation-transporting ATPase superfamily signature 248 262 - -
Bva06g00674 1126 PRINTS P-type cation-transporting ATPase superfamily signature 545 555 - -
Bva06g00674 1126 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Bva06g00674 1126 PRINTS P-type cation-transporting ATPase superfamily signature 399 413 - -
Bva06g00674 1126 SFLD C1.7: P-type atpase like 382 651 - -
Bva06g00674 1126 Gene3D - 12 86 - -
Bva06g00674 1126 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 173 679 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00674 1126 SFLD p-type atpase 382 651 IPR044492 -
Bva06g00674 1126 SUPERFAMILY HMA, heavy metal-associated domain 14 83 IPR036163 GO:0046872
Bva06g00674 1126 ProSitePatterns E1-E2 ATPases phosphorylation site. 401 407 IPR018303 -
Bva06g00674 1126 ProSiteProfiles Heavy-metal-associated domain profile. 18 84 IPR006121 GO:0046872
Bva06g00674 1126 SUPERFAMILY Calcium ATPase, transmembrane domain M 150 393 IPR023298 -
Bva06g00674 1126 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 150 490 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00674 Bva-Chr6 6560016 6567600 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00674 14 856 Primary Pumps ATPases AT4G30110 61.690 0.0 1065
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00674 K01534 - gmx:100817567 1427.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00674 06 6560016 6567600 Bva06g00674 06 6560016 6567600 ECH