Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00655 ATGTCTTCTTCATGTTTAAGCGGAGCTGGTGGAAGAACCTATGGGTTTGATTTCGATTTTGTCAAATCTCCATCTATATATACCCGAACTTCGCACACTTCTTCCACTTCTTCAACCATCTCTGAATCTAGCAATTCCCCAATTACAATCTCCACTCGAAAACCTCGAACCCCTCGAAAACGTCCCAACCAAACTTACAATGAAGCTGCTGCTCTTCTTTCCACAGCATACCCAAATCTCTTCTCCaccaaaaaccttaaaaaaccAGCCAAGTTCACTAAACCAACTGATAGTTTGGTCGATGAATCTTCAGAATTGTTATTGCCTTTCAGAGTATTCGACAGCTCCTCTTTCCTTCTTCACCAGCCAATCCAACACAAACCTAGTTTTCTAATTGGGCCCAAAGTAGTTAACCTGCAAGAAAAACCATGCCAGAGTCCAGGGGAAATTAGCTCGCGAGTGAATTCGTTGGAATTGGATGATGATTGTCAAGAAGACTTAGATGCGGAATCGATTCTCGATGAGGAAATTGAAGAGGGAATAGACAGTATTATGGGCAGTAGAGCCGATGACTCCAATGGCGCCTCCTATCACAGCAGCGCCCAATTGAATCCGGGGATTGGGAATTTTGCTTTTGGCGGGAAAATCGACTTCCGACTGGGATTGAGAAGAGCAGGAGTAAGAGCTCTCCGGCATGTAGATGAAGAGAATTCGTGGAATTTCTCTACGGTTGATATACTTCAAATCTCACCGAAAATCAACAGGCCCTCGGCTTTGGTTTCAGTagataagaagaagaagaagaaaaagaaggtggAGAAATCGCCGGTGGAATCGAAGGATTTTGAATTGCCGAAAGAGAATTCAATTCCCAAATCCAATCCTGGGTTGCTGTTGAAATTGAATTACGACGACGTTTTGAAAGCATGGTCTGATAAAGGGTGTCCATTTGCCCAAGATAGTCCCGGCCCCGATGTACTGGGAAATGATGTAACTGCCCGGCTGGCCCAGATTGATCTGTTTACGGACCATGGTGGAGCAGGAGAAGCTAGCTTGTTGcgagataaagaaaaatgccaCACTCGACTCTTCTCCAAGAAGATCAGATATCAGGTCAAAAAAATCAACGTAGATCGACGGCCCACGACGAAGGGTGGATTCGTTAAGAGAGACGATAACTA 1181 0.4234 MSSSCLSGAGGRTYGFDFDFVKSPSIYTRTSHTSSTSSTISESSNSPITISTRKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKKPAKFTKPTDSLVDESSELLLPFRVFDSSSFLLHQPIQHKPSFLIGPKVVNLQEKPCQSPGEISSRVNSLELDDDCQEDLDAESILDEEIEEGIDSIMGSRADDSNGASYHSSAQLNPGIGNFAFGGKIDFRLGLRRAGVRALRHVDEENSWNFSTVDILQISPKINRPSALVSVDKKKKKKKKVEKSPVESKDFELPKENSIPKSNPGLLLKLNYDDVLKAWSDKGCPFAQDSPGPDVLGNDVTARLAQIDLFTDHGGAGEASLLRDKEKCHTRLFSKKIRYQVKKINVDRRPTTKGGFVKRDDN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00655 393 MobiDBLite consensus disorder prediction 265 286 - -
Bva06g00655 393 PANTHER OS02G0148000 PROTEIN 1 390 - -
Bva06g00655 393 ProSiteProfiles CCT domain profile. 348 390 IPR010402 GO:0005515
Bva06g00655 393 MobiDBLite consensus disorder prediction 30 63 - -
Bva06g00655 393 MobiDBLite consensus disorder prediction 30 53 - -
Bva06g00655 393 Pfam CCT motif 350 390 IPR010402 GO:0005515
Bva06g00655 393 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 390 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00655 Bva-Chr6 6436640 6439750 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00655 292 390 C2C2-CO-like Transcription Factor Family AT1G68520 35.345 3.03e-13 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva06g00655 CCT 2.2e-07 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00655 - - aprc:113845796 423.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g00996 05 5077429 5081169 Bva06g00655 06 6436640 6439750 BWGD
Bva06g00655 06 6436640 6439750 Bva06g00655 06 6436640 6439750 ECH