Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00642 ATGAGTAAAGAGGAAGTTAAGGGAGGAGCTGTGGTTCCTGAATCTGTTTTGAAGAAGCAGAAAAGGAGTGAGGAATGGGCTCTGGCAAAAAAGCAGGACCTTGAAGCTGCTAAGAAAGCAAGCtctgaaaaaaggaaattgattTACAGCAGAGCTAAATTGTATGCAAAGGAGTATGATGAACAGCAAAAGGAGCTCATCAGATTGAAGCGTGAAGCCAAGCTTAAGGGTGGATTTTATGTCGACCCAGAAGTTAAGCTGCTTTTCATCATCAGGATCCGCGGtATCAATGCTATGAACCCACAAACAAGGAAGATTTTGCAGCTTCTTCGGTTGAGGCAGATCTTCAATGGCGTCTTTCTCAAGGTTAACAAAGCAACATTGAATATGCTTCACAGGGTGGAGCCTTATGTTACCTATGGATACCCTAATTTAAAGAGTGTGAGAGAACTGATCTACAAGAGGGGTTACGGGAAAGTTGACAAACAGAGAATTGCTTTGACAGACAACTCAATTATTGATCAGGCTTTAGGCAAGCATGGTATTATTTGCATGGAAGACCTGATCCATGAGATCATGACTGTCGGACCCCACTTCAAGGAAGCTAACAACTTCCTATGGCCTTTCAAGCTCAAGGCCCCTCTTGGTggtttgaagaagaaaagaaatcattatGTTGAAGGAGGTGATGCTGGAAACCGTGAAGATTATATCAACGAGCTCATTAGGAGGATGAATTA 740 0.4068 MSKEEVKGGAVVPESVLKKQKRSEEWALAKKQDLEAAKKASSEKRKLIYSRAKLYAKEYDEQQKELIRLKREAKLKGGFYVDPEVKLLFIIRIRGINAMNPQTRKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVRELIYKRGYGKVDKQRIALTDNSIIDQALGKHGIICMEDLIHEIMTVGPHFKEANNFLWPFKLKAPLGGLKKKRNHYVEGGDAGNREDYINELIRRMN 246
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00642 246 Pfam Ribosomal protein L30p/L7e 88 138 IPR016082 -
Bva06g00642 246 TIGRFAM uL30_euk: 60S ribosomal protein uL30 13 246 IPR005998 GO:0000463|GO:0003735|GO:0022625
Bva06g00642 246 PANTHER 60S RIBOSOMAL PROTEIN L7 8 246 - -
Bva06g00642 246 Pfam Ribosomal L30 N-terminal domain 12 83 IPR012988 -
Bva06g00642 246 SUPERFAMILY Ribosomal protein L30p/L7e 87 246 IPR036919 -
Bva06g00642 246 CDD Ribosomal_L7_archeal_euk 87 246 IPR035808 -
Bva06g00642 246 Gene3D - 192 246 IPR036919 -
Bva06g00642 246 Gene3D - 87 191 IPR036919 -
Bva06g00642 246 PANTHER 60S RIBOSOMAL PROTEIN L7 8 246 IPR039699 -
Bva06g00642 246 Coils Coil 52 76 - -
Bva06g00642 246 ProSitePatterns Ribosomal protein L30 signature. 106 138 IPR018038 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00642 Bva-Chr6 6342803 6345882 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00642 5 246 Cytoplasmic Ribosomal Protein Gene Family AT3G13580 83.058 5.83e-154 426
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00642 06 6342803 6345882 Bva06g00642 06 6342803 6345882 ECH