Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00639 atgaacaagaacaagaatgATATAGAGACTGGAAGTAGCGGCTCCCCCGTCGCCGAAAACTGCAATTCATCGGACCCGTTTAATATACTCCGCACTAAGGATGCTTCAATTGACCGTCTCAAGCGTTGGAGAcaagCCGCCCTTGTGTTAAATGCTTCTCGTCGATTTCGTTACACCTTGGacttgaaaaaagaagaggaaagaaagcGATTATTGGGCGAGATTAAAGCGCATATACAAGCAGTTAGAGCTGCATATCTTTTCAAAGCCTCCCTTTCCATTTTACCGCCAAATGAAACCCCAACACCTCCGCCAATCTCCGAGGGCGAATTTTCTATTGATCAAGAGCAACTTGCTTCAATTTCAAAGGATCAGAATATTACTATTCTGCAGCAATATGGCGGGGTTAAAGGGCTGTCGGATTGTTTGAAAACCAATTTAGAGAAGGGGATTCATGGGGATGATGAAGACTTAGTAAAACGGAGGAATGCATTTGGTTCAAACAGCTATCctagaaagaaaggaaggaattTTTGGATGTTTGTGTGGGATGCTTGCAAGGATTTAACCTTGATTATATTAATGGTAGCTGCGGTTGCATCATTGGCATTGGGGATAAAATCTGAGGGTATTAAGGAAGGCTGGTATGATGGGGGAAGCATCGCTTTTGCTGTTATTTTGGTTATTGTTGTTACAGCTATAAGTGATTACAAGCAGTCACTTCAGTTTCAAAGTCtaaatgaagagaagagaaatatacaTTTGGAGGTTATCAGAGGTGGTCGAAGAGTGGAAATCTCTATATATGATGTTGTTGTCGGTGATGTTATACCTCTTAATATTGGTAACCAGGTACCTGCCGATGGAATTTTGATTAATGGTCACTCTCTTGCAATCGATGAATCAAGTATGACTGGGGAGAGCAATACTATCCCAAAGAATTCTAAGGACCCCTTTCTGATGTCTGGATGTAAAGTTGCAGATGGTAGTGGCACTATGCTGGTAACTGCTGTTGGTGTTAATACGGAATGGGGGCTTCTAATGTCTAGTATTTCAGAAGACACCGGTGAAGAAACACCCTTGCAGGTACGCTTAAACGGTGTTGCCACCTTTATTGGTATTGTTGGACTCTCTGTAGCTGTTGCTGTCTTGATTGTGCTACTGGTCAGATATTTCACTGGACATACTAGAAATGCAGATGGAACTGTTCAATTTACAGCAGGCAAGACAAAAGTTGGTGATGCTATTGATGGAGCAATTAAGATAGTCACGGTTGCGGTCACCATCGTCGTGGTTGCAGTGCCTGAAGGGCTCCCTTTAGCAGTTACACTAACGCTTGCCTACTCAATGAGAAAAATGATGGCAGATAAAGCTTTGGTTAGAAGGCTTTCAGCCTGCGAGACAATGGGCTCTGCCACAACCATTTGCAGTGATAAGACTGGAACTTTGACAATGAATCAGATGACTGTGGTTGAGGGTTACGTTGGTGGGAAGAAGATGGATTCTCCTGACAACAAGTCAGCTATCTCTACAAAGCTCAGGTCTTTGCTCATTGAAGGTGTTGCGCAGAATACCAATGGCAGTGTTTATATATCTGAGGGCAGTAATGATGTTGAGGTTTCTGGATCACCAACAGAAAAAGCTATCTTACACTGGGCAGTCAAGCTGGGGATGAATTTTGAGGCTGTCAGATCAGAATCATCAATCCTTCATGTTTTTCCATTCAATTCTGACAAAAAACGAGGTGGAGTTGCTGTAAAGACGCCTGACTCTCAAGTTCATATACATTGGAAAGGTGCTGCAGAGATTGTCTTAGCCTGTTGTACTGGCTATATGGATGCAAATGATCAGTTAGTACAGATGGATGATGAAAAgATGgcattttttaagaaatctaTCGAAGATATGGCGGCCGTTAGTTTGCGTTGCGTTGCCATTGCATATCGGTCATACAAAATGGAGAATGTTCCGCCAAGTGAAGAACTTTCTGGCTGGTCATTACCTGAGGATGATCTCATTTTACTGGCAATTGTTGGCCTGAAGGATCCTTGTCGACCTGGTGTTAAAGAGTCAGTGAAACTTTGCCAAAAAGCTGGAGTTAAGGTACGAATGGTCACTGGAGATAATGTGAAAACTGCTAAAGCAATTGCTATGGAGTGTGGAATACTTAGTGAGAACGACACAGAGGCCAGTATCATTGAAGGAAAGGCATTCCGTGTCTTGAATGATTCAGAAAGAGAAGATGTTGCTGAGAAGATATCGGTTATGGGACGGTCGTCTCCTAACGACAAACTTTTACTTGTGCAAGCATTGAAGAGGAGGGGCCATGTGGTTGCTGTAACCGGGGATGGCACTAATGATGCTCCTGCGCTACACGAGGCTGATATAGGTCTTTCAATGGGCATTCAAGGGACAGAAGTTGCGAAAGAGAGTTCTGATGTCATCATTTTGGATGAcaattttgcttctcttgtgAAGGTTGTGAGATGGGGACGGTCTGTATATGCAAATATTCAGAAATTTATCCAGTTTCAGCTTACAGTAAATGTTGCAGCTCTCATTATTAACGTTGTCGCTGCAGTTTCCACCGGTGATGTCCCATTAAATGCAGTACAGCTTCTCTGGGTAAATCTTATTATGGATACTCTTGGAGCACTGGCCTTGGCAACTGAACCACCAACTAATCACCTGATGGATAGGCCTCCAGTAGGTCGAAGAGAACCTCTCATAACAAACATTATGTGGAGGAATCTTCTGATACAGGCAATGTATCAAGTGTCCGTCCTGCTCGTGCTCAATTTCCGGGGTAGGAGCATACTGGGTCTTGAGCATGACGCCAACGACCACGCTATCAAAGTGAAGAATACATTGATATTTAATGCATTTGTTCTCTGTCAAGTGTTCAACGAATTTAATGCTCGAAAACCAGATGAATACAACATATTCAAGGGAGTCAGAAAAAACTACCTCTTTGTTGGGATAGTGGGAATAACTGTCGTGCTTCagATTATCATCATTGAATTTCTTGGCAAGTTTACTTCAACAGTGAGGCTTAATTGGAAACAGTGGATCATTTGCGTCGTCATTGGGTTCATTAGTTGGCCTCTCGCTGTCCTCGGGAAACTGATACCAGTACCAAAGACTTCCGTCAATCTGGTCTTTAGAATCTGTAGACGGACAACTTCCAGAAGGAAGGAACACGAGGCTTCTCAACAGTCATG 3221 0.4151 MNKNKNDIETGSSGSPVAENCNSSDPFNILRTKDASIDRLKRWRQAALVLNASRRFRYTLDLKKEEERKRLLGEIKAHIQAVRAAYLFKASLSILPPNETPTPPPISEGEFSIDQEQLASISKDQNITILQQYGGVKGLSDCLKTNLEKGIHGDDEDLVKRRNAFGSNSYPRKKGRNFWMFVWDACKDLTLIILMVAAVASLALGIKSEGIKEGWYDGGSIAFAVILVIVVTAISDYKQSLQFQSLNEEKRNIHLEVIRGGRRVEISIYDVVVGDVIPLNIGNQVPADGILINGHSLAIDESSMTGESNTIPKNSKDPFLMSGCKVADGSGTMLVTAVGVNTEWGLLMSSISEDTGEETPLQVRLNGVATFIGIVGLSVAVAVLIVLLVRYFTGHTRNADGTVQFTAGKTKVGDAIDGAIKIVTVAVTIVVVAVPEGLPLAVTLTLAYSMRKMMADKALVRRLSACETMGSATTICSDKTGTLTMNQMTVVEGYVGGKKMDSPDNKSAISTKLRSLLIEGVAQNTNGSVYISEGSNDVEVSGSPTEKAILHWAVKLGMNFEAVRSESSILHVFPFNSDKKRGGVAVKTPDSQVHIHWKGAAEIVLACCTGYMDANDQLVQMDDEKMAFFKKSIEDMAAVSLRCVAIAYRSYKMENVPPSEELSGWSLPEDDLILLAIVGLKDPCRPGVKESVKLCQKAGVKVRMVTGDNVKTAKAIAMECGILSENDTEASIIEGKAFRVLNDSEREDVAEKISVMGRSSPNDKLLLVQALKRRGHVVAVTGDGTNDAPALHEADIGLSMGIQGTEVAKESSDVIILDDNFASLVKVVRWGRSVYANIQKFIQFQLTVNVAALIINVVAAVSTGDVPLNAVQLLWVNLIMDTLGALALATEPPTNHLMDRPPVGRREPLITNIMWRNLLIQAMYQVSVLLVLNFRGRSILGLEHDANDHAIKVKNTLIFNAFVLCQVFNEFNARKPDEYNIFKGVRKNYLFVGIVGITVVLQIIIIEFLGKFTSTVRLNWKQWIICVVIGFISWPLAVLGKLIPVPKTSVNLVFRICRRTTSRRKEHEASQQS 1073
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00639 1073 Gene3D - 184 1034 - -
Bva06g00639 1073 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 748 861 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00639 1073 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 417 544 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00639 1073 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 483 680 IPR023299 GO:0000166
Bva06g00639 1073 Pfam Cation transporting ATPase, C-terminus 866 1043 IPR006068 -
Bva06g00639 1073 SFLD Haloacid Dehalogenase 458 833 - -
Bva06g00639 1073 Pfam Cation transporter/ATPase, N-terminus 134 201 IPR004014 -
Bva06g00639 1073 Gene3D - 486 683 IPR023299 GO:0000166
Bva06g00639 1073 Pfam E1-E2 ATPase 254 454 - -
Bva06g00639 1073 PANTHER CATION TRANSPORTING ATPASE 18 1059 - -
Bva06g00639 1073 PRINTS P-type cation-transporting ATPase superfamily signature 300 314 - -
Bva06g00639 1073 PRINTS P-type cation-transporting ATPase superfamily signature 676 687 - -
Bva06g00639 1073 PRINTS P-type cation-transporting ATPase superfamily signature 781 800 - -
Bva06g00639 1073 PRINTS P-type cation-transporting ATPase superfamily signature 805 817 - -
Bva06g00639 1073 PRINTS P-type cation-transporting ATPase superfamily signature 698 708 - -
Bva06g00639 1073 PRINTS P-type cation-transporting ATPase superfamily signature 476 490 - -
Bva06g00639 1073 SUPERFAMILY Calcium ATPase, transmembrane domain M 133 1045 IPR023298 -
Bva06g00639 1073 MobiDBLite consensus disorder prediction 1 25 - -
Bva06g00639 1073 ProSitePatterns E1-E2 ATPases phosphorylation site. 478 484 IPR018303 -
Bva06g00639 1073 Pfam Ca2+-ATPase N terminal autoinhibitory domain 24 67 IPR024750 GO:0005516
Bva06g00639 1073 Gene3D - 35 90 - -
Bva06g00639 1073 SFLD p-type atpase 458 833 IPR044492 -
Bva06g00639 1073 SUPERFAMILY Calcium ATPase, transduction domain A 254 349 IPR008250 -
Bva06g00639 1073 TIGRFAM ATPase-IIB_Ca: calcium-translocating P-type ATPase, PMCA-type 123 1045 IPR006408 GO:0005388|GO:0005524|GO:0016020|GO:0070588
Bva06g00639 1073 SMART Cation_ATPase_N_a_2 132 206 IPR004014 -
Bva06g00639 1073 CDD P-type_ATPase_Ca_PMCA-like 160 914 - -
Bva06g00639 1073 Pfam haloacid dehalogenase-like hydrolase 473 795 - -
Bva06g00639 1073 PRINTS H+-transporting ATPase (proton pump) signature 629 647 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00639 1073 PRINTS H+-transporting ATPase (proton pump) signature 813 838 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00639 1073 PRINTS H+-transporting ATPase (proton pump) signature 781 797 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Bva06g00639 1073 PANTHER CALCIUM-TRANSPORTING ATPASE 18 1059 - -
Bva06g00639 1073 Gene3D - 473 826 IPR023214 -
Bva06g00639 1073 Gene3D - 156 352 - -
Bva06g00639 1073 SUPERFAMILY HAD-like 474 886 IPR036412 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00639 Bva-Chr6 6319961 6335227 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00639 7 1058 Primary Pumps ATPases AT4G29900 73.201 0.0 1575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00639 K01537 - gmx:100792945 1667.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01007 05 5156495 5175502 Bva06g00639 06 6319961 6335227 BWGD
Bva06g00639 06 6319961 6335227 Bva06g00639 06 6319961 6335227 ECH