Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00631 ATGGCAGTAGATCTGGTAGGGCTACCTAGGATGGAAGAGCAGTTAGCGATACAGGAAGCTGCTTCGGCTGGGTTGAAGAGCATGGAACATCTGATTCGTGTGCTTTCTTCTCAGGCCCCTCAGACCCATCACCATAACCATCAACTCAACCAGCTTGACTGCGGAGAAATCACCGACTTCACCGTTTCTAAGTTTAAGCAAGTTATTAACTTATTGAATCGAACCGGGCACGCCCGTTTTCGCCGTGGACCTTCAAATCCTTCGTCCTCTAGCTCTGCCCCTTCCCAATCTGAAAAATTCAACCCGCTCCAGACCCAATTCGGACTCAAGCCGGTTCAATCGCACTCCCATGATCAGGAATTGAATTTGAGTCTTGATTTTGCGAAGCCCAACCAGGTAAAATCGGATCCTAAAGCGTCTGCCGATTTATCTCAATACTCCAAGGACACTTTCAGTATATCCCCGCCCATGTCCACCAACACATCGTCGTTTATGTCGTCCATAACCGGAGACGGCAGCGTTTCAGACGGTAAGATAGGTGCATCGCTGCTTGCCGCTCCGGCACCCCCTGCCTCCGCAGCTAAACCCCCTCTATCTTCATCTCACCGAAAGAGGTGTCATGATGCTACCCTCTCTGGAAAAGTTTCATCCTCCTCTCACTGCCATTGCTCTAAGCGAAGGAAATCCCGAGTGAAGCGAGCAATCCGTGTGCCGGCGACAAGCTCCAAGATCGCTGATATTCCGCCGGACGAGTACTCTTGGAGAAAATACGGTCAGAAGCCGATCAAGGGTTCACCCTACCCACGTGGGTATTACAAGTGCAGTACGGTGAGAGGGTGCCCTGCGAGGAAGCACGTGGAGCGAGCGCAAGACGATCCGAAGATGCTGATCGTGACATACGAGGGAGAGCACCGTCACCCGCAAGGGCAAGCGGCAGAAACAACCGCCGTCGGCGTCGGCTTCAGTATTCAGTA 974 0.5246 MAVDLVGLPRMEEQLAIQEAASAGLKSMEHLIRVLSSQAPQTHHHNHQLNQLDCGEITDFTVSKFKQVINLLNRTGHARFRRGPSNPSSSSSAPSQSEKFNPLQTQFGLKPVQSHSHDQELNLSLDFAKPNQVKSDPKASADLSQYSKDTFSISPPMSTNTSSFMSSITGDGSVSDGKIGASLLAAPAPPASAAKPPLSSSHRKRCHDATLSGKVSSSSHCHCSKRRKSRVKRAIRVPATSSKIADIPPDEYSWRKYGQKPIKGSPYPRGYYKCSTVRGCPARKHVERAQDDPKMLIVTYEGEHRHPQGQAAETTAVGVGFSIQ 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00631 324 MobiDBLite consensus disorder prediction 304 324 - -
Bva06g00631 324 Pfam Plant zinc cluster domain 203 246 IPR018872 -
Bva06g00631 324 ProSiteProfiles WRKY domain profile. 243 309 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00631 324 SUPERFAMILY WRKY DNA-binding domain 246 308 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00631 324 Pfam WRKY DNA -binding domain 250 307 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00631 324 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 7 312 - -
Bva06g00631 324 Gene3D WRKY domain 231 309 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bva06g00631 324 MobiDBLite consensus disorder prediction 76 101 - -
Bva06g00631 324 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 7 312 IPR044810 GO:0003700
Bva06g00631 324 SMART WRKY_cls 248 308 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bva06g00631 324 MobiDBLite consensus disorder prediction 82 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00631 Bva-Chr6 6287692 6289610 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00631 1 313 WRKY Transcription Factor Family AT2G24570 56.347 1.01e-106 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bva06g00631 WRKY 2.3e-26 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01013 05 5204239 5206057 Bva06g00631 06 6287692 6289610 BWGD
Bva06g00631 06 6287692 6289610 Bva06g00631 06 6287692 6289610 ECH