Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00620 ATGAAGTTACCTCCTCGTCTAGTTGAGCTAGAAAGCTTGCTTCCCTCCTCCCTGAAAATGCCTCGCCGAGTGCTTCAAGTGGGATCTCCTCCGTCCCCTCAAGATGACTCGAAGTCCAAGACGTCTCGTAATGCAGCATTGTTCTTTTTCCTTGGAGGGGTAGTCCTGCTCACCATAATTCTGATTATCCTATTTCTGTATCGGACGCGTAATAAATCAGCAACGCTGAAGGGAAAAAAGGCTTCGAGTAATCAGCAGCAAGCAGAGGTGATAATGGTAGCTCCAAGCAAACAGCAGCAAGCATCAATGGAGATCATCAGTGGGAGCTTCCGGACAATCAGCTATTTTGATTTCCAGACATTAAGGAGGGCAACCGGGAATTTTGATCCTGCTAATCTTCTTGGAAGTGGTGGATTTGGGCCTGTCTACCGGGGTAAGTTACCAGATGGAAGAAGTTTGAACCTCATATTACACGGAAACAGTGACCAGTTTCTTAATTGGAATACTAGGTTCTTTCCAGAAGACCAAGCTTACTTGAGCACTACATTTGCTGGAACATTAGGTTATACTGCACCTGAATATGCCATTAGAGGAGAATTGTCTGAAAAAGCAGACATTTACAGTTTTGGAGTTCTTGTGCTTGAAATCATTAGTTGCCGGAAAAACACAGATCTTACATTGCCATCAGAAAAGCAGTACCTCCCCGAATATGCATGGAGACTTTACGAGAGGTCAACGTTGATGGATCTTGTAGACCCAAAATTGAAAGAAGATGGATTTGTGGAAAAGGATATTATGCAGGCCATCCATGTTGCCTTGCTATGTCTTAATTCTCATGCACATTTGAGGCCTCCGATGTCGGAGATTGTCGCATTATTGACATTCAAAATTGAGATGGTCACAACACCAATGAGACCAGCCTTCCTCGAACGAAGGCCTAGAAATAGAAGATATGATGATAACCATTCTTGGGAAGCCATAACTGATGCTTTCCCATCTCCACTGGTCAGTGATTCTACTGTCACTACTCCTAAACTGAGAGGTTA 1046 0.4379 MKLPPRLVELESLLPSSLKMPRRVLQVGSPPSPQDDSKSKTSRNAALFFFLGGVVLLTIILIILFLYRTRNKSATLKGKKASSNQQQEVIMVAPSKQQQASMEIISGSFRTISYFDFQTLRRATGNFDPANLLGSGGFGPVYRGKLPDGRSLNLILHGNSDQFLNWNTRFFPEDQAYLSTTFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEKQYLPEYAWRLYERSTLMDLVDPKLKEDGFVEKDIMQAIHVALLCLNSHAHLRPPMSEIVALLTFKIEMVTTPMRPAFLERRPRNRRYDDNHSWEAITDAFPSPLVSDSTVTTPKLRG 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00620 347 ProSiteProfiles Protein kinase domain profile. 1 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00620 347 SUPERFAMILY Protein kinase-like (PK-like) 113 321 IPR011009 -
Bva06g00620 347 PANTHER RECEPTOR-LIKE KINASE 103 146 - -
Bva06g00620 347 PANTHER RECEPTOR-LIKE KINASE 169 309 - -
Bva06g00620 347 Gene3D Transferase(Phosphotransferase) domain 1 164 307 - -
Bva06g00620 347 Pfam Protein tyrosine and serine/threonine kinase 179 290 IPR001245 GO:0004672|GO:0006468
Bva06g00620 347 Gene3D Phosphorylase Kinase; domain 1 83 162 - -
Bva06g00620 347 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 169 309 - -
Bva06g00620 347 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 103 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00620 Bva-Chr6 6244850 6247774 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00620 169 308 Receptor kinase-like Gene Family AT1G56120 42.857 1.69e-34 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva06g00620 PK_Tyr_Ser-Thr 3.5e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00620 - - adu:107478947 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01022 05 5246095 5249591 Bva06g00620 06 6244850 6247774 BWGD