Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00588 ATGATGGTTGCTCACGGTGGCTGTGGTGATAGTGGTGGTGGCGGAGGTGGGGAGTTCTGTTCGGTGTTCTCGTCCACTCTGTTGGCGGAACCCATTGATAAGGTATTACTGAATAAAGCTGCGGAACCAGAGAATGTGAAAGCCGCGGAGGAAGCAGTGAAGGGCAAATCAGAACAAGTAACCGTCTTTGGCGATGAAGCTCGCGCTAATTCCGGTTCCTCCTTTGGTTCCGAAGACGAGGATCACAACGACGTTTTCCAGTCATCGTCTTCGTTCATGAAATTCAGCGAAGATTCAGAGAGGAAAACCTCCGAAGTGACCGAAGAGGGGCCTATTGAAGTGGTTCGGCTGGTTAATATTAAAGAAGAGGAATCTGGAGAATTACATGATTGTGATGATGAAAGAGGTGAATCCGGTGATCATTGTTGTAATGGTGTTAATGGCTCGTCATCTTCCTCGTCGATTGAGTTGCCGAAACCTATCGAGGGGTTGCACGAGTTGGGTCCACCACCGTTCCTGAAGAAGGCCTTTGAAATGGTGGAGGACCCAGAAACCGACCCGATTGTGTCATGGAGCGAATCTCGTGATAGCTTCATCGTTTGGGATTCTCACGAATTCTCCAAAGTCATTCTCCCTAAATACTTTAAGCACAGCAATTTCTCCAGCTTCATTCGCCAGCTTAACACCTATGGGTTTAGGAAGGTTGATTCGGATCGTTGGGAGTTTGCAAATGAGGGATTTCGGAGAGGGAAGAAGCATTTGCTGAAGAACatcagaagaagaagcaagtaTAACAAACAGCAACAAGGAACATTCGATTTGACGAAGCCCAGCCTGGAAGCTGAATTTGAGAAACTgaaaaaagatcaaaacaTATTGAACATGGAAATTCTGAAGCTGAGACAGCAACAGGAGAATTCACAGATTCACCTCACAAATGTGCAAGAGCGAATACGGTTCGCTGAGATGAAGCAACATCAGATGCTATTTTTCCTAACCAGAATGGCTAGAAGGCCAACCTCAATTCAACAGTTAATCCAGATGATAAAGCGAAAAAGAGAGCTTGATGGGGGTGAGATAAGCAAGAGATGCAGATTGATAGGAACACAATACCCAACTAACTTTCCCAAGCCCACGAACATTAATATACCCAGTGTTGATTGTAGAAAACGAGTTCATGATGAAGTGGCAACATTGCAACCCGAGCTCAATGCACTCTTGCCTGGAGAAGTGAACACTGCCATCATGAATCCCTCACCCCTTCCTCCATTGAAAGATGAATTATGCAGGCCTACTATAGAAGGCATAAGGACCAATGCTTCTAGAGCAAATGCACCAGATGTATCTTCTGCCTATCGTGTTGTGTCAGAAAAACTGATGAGGGAAAACTCGGTCGTGGATGAAGAACTAGAGGTGAATGACACAAATATCTATCTTGAATTGGAGGACTTGATAAGTAAGCCATCGGATTGGGGTGCATCCGCAAGTGGATTGGTGGGACAAACTGGTTGCATGTG 1517 0.4469 MMVAHGGCGDSGGGGGGEFCSVFSSTLLAEPIDKVLLNKAAEPENVKAAEEAVKGKSEQVTVFGDEARANSGSSFGSEDEDHNDVFQSSSSFMKFSEDSERKTSEVTEEGPIEVVRLVNIKEEESGELHDCDDERGESGDHCCNGVNGSSSSSSIELPKPIEGLHELGPPPFLKKAFEMVEDPETDPIVSWSESRDSFIVWDSHEFSKVILPKYFKHSNFSSFIRQLNTYGFRKVDSDRWEFANEGFRRGKKHLLKNIRRRSKYNKQQQGTFDLTKPSLEAEFEKLKKDQNILNMEILKLRQQQENSQIHLTNVQERIRFAEMKQHQMLFFLTRMARRPTSIQQLIQMIKRKRELDGGEISKRCRLIGTQYPTNFPKPTNINIPSVDCRKRVHDEVATLQPELNALLPGEVNTAIMNPSPLPPLKDELCRPTIEGIRTNASRANAPDVSSAYRVVSEKLMRENSVVDEELEVNDTNIYLELEDLISKPSDWGASASGLVGQTGCM 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00588 505 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 150 491 - -
Bva06g00588 505 SUPERFAMILY "Winged helix" DNA-binding domain 168 261 IPR036390 -
Bva06g00588 505 Coils Coil 283 303 - -
Bva06g00588 505 Pfam HSF-type DNA-binding 172 261 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g00588 505 ProSitePatterns HSF-type DNA-binding domain signature. 211 235 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g00588 505 PRINTS Heat shock factor (HSF) domain signature 210 222 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g00588 505 PRINTS Heat shock factor (HSF) domain signature 223 235 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g00588 505 PRINTS Heat shock factor (HSF) domain signature 172 195 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g00588 505 MobiDBLite consensus disorder prediction 126 140 - -
Bva06g00588 505 SMART hsfneu3 168 261 IPR000232 GO:0003700|GO:0006355|GO:0043565
Bva06g00588 505 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 150 491 IPR027725 -
Bva06g00588 505 Gene3D - 165 262 IPR036388 -
Bva06g00588 505 MobiDBLite consensus disorder prediction 126 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00588 Bva-Chr6 6075950 6078538 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00588 158 369 HSF AT2G26150 52.055 8.27e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Bva06g00588 HSF_DNA-bind 7.5e-33 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00588 K09419 - gmx:100818430 472.241
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00588 06 6075950 6078538 Bva06g00588 06 6075950 6078538 ECH