Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00583 ATGGAACCTCGTGTTGGTAACAAGTTTCGGCTGGGTCGGAAGATCGGTAGCGGCTCCTTCGGGGAGATCTATTTAGGTACTAATATTCAAACTAACGAAGAGGTTGCAATTAAGCTTGAAAATGTCAAGACAAAGCATCCTCAATTGCTGTATGAGTCCAAGTTATACAGAATTCTCCAGGGAGGAACTGGAATTCCGAATGTTAGATGGTTTGGAGTGGAAGGGGATTATAATGTTCTCGTGATGGATCTGCTTGGACCTAGTCTTGAAGATCTATTCAACTTCTGCAGTAGAAAGCTCTCGCTGAAGACTGTTCTTATGCTTGCTGATCAAATGATCAACCGTGTTGAATTTATTCATTCAAAGTCATTTCTGCATCGGGATATCAAACCAGATAATTTTCTCATGGGCTTAGGAAGGCGTGCAAACCAGGTTTACTGTATTGATTTTGGTTTGGCTAAGAAATATCGAGATAGTACAACTCATCAACACATTCCTTACAGggaaaataagaatttgacAGGAACTGCTAGATATGCCAGCATGAACACTCACCTTGGAATTGAACAAAGCCGAAGAGATGATTTAGAGTCTCTTGGATATGTCCTGATGTACTTCCTTAGAGGAAGTCTTCCTTGGCAGGGACTTAAGGCAGGAACCAAGAAAcagaagtatgagaaaatCAGTGAGAAAAAGGTTTCTACCTCAATTGAGGCTTTGTGTCGAGGTTACCCAACAGAATTTGCATCATACTTTCATTACTGTCGTTCATTGCGGTTTGATGATAAGCCAGATTATGCTTATCTCAAAAGAATATTTCGTGATCTCTTTATTCGTGAAGGGTTTCAATTTGATTATGTGTTTGATTGGACTATCTTGAAGTATCAGCAGTCACAGTTGGCCACTCCTCCAGCACGTGCCCTTGGTCCCAGTGTTGGAACTAGTTCTGGAATGCCTCCTGCTGCTGCCAATGCTGATAGACACACAGGAGAGGAAGAAGGGCGACCTCCTGGACTTGTTTCGGTGGATTCCACTAGGCGAAGAATGTCGGGTCCCATTTTAAATTCTTTATCGGGCACCCATGTCTTGGGCCAGACTAGTGGATCATCCAGGCGAGTTGCTGTCTCTAGTAGCCGTGATGCATTTCCTGGTGGTGAGTCGGATCTTCGCACTCGTACCACTGAGGCTAGCCCTGGAACCGCACATAGAATTTCAAGTGGGCAAAGAAGTTCACCGATTGGATCATCAGATCCTAAGAGAATGGCATCTGGGAAAAATGCTGCTAATGCCAAGAATTATGAAACTGCACTCAAGGGCATTGAGAGTTTGCAGTTAGAGAATGATGAGAGGGCCCATTATTA 1361 0.4269 MEPRVGNKFRLGRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKLYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCSRKLSLKTVLMLADQMINRVEFIHSKSFLHRDIKPDNFLMGLGRRANQVYCIDFGLAKKYRDSTTHQHIPYRENKNLTGTARYASMNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKQKYEKISEKKVSTSIEALCRGYPTEFASYFHYCRSLRFDDKPDYAYLKRIFRDLFIREGFQFDYVFDWTILKYQQSQLATPPARALGPSVGTSSGMPPAAANADRHTGEEEGRPPGLVSVDSTRRRMSGPILNSLSGTHVLGQTSGSSRRVAVSSSRDAFPGGESDLRTRTTEASPGTAHRISSGQRSSPIGSSDPKRMASGKNAANAKNYETALKGIESLQLENDERAHY 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00583 453 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00583 453 PANTHER CASEIN KINASE I-LIKE 1 437 - -
Bva06g00583 453 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00583 453 MobiDBLite consensus disorder prediction 390 417 - -
Bva06g00583 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Bva06g00583 453 SUPERFAMILY Protein kinase-like (PK-like) 5 290 IPR011009 -
Bva06g00583 453 Gene3D Transferase(Phosphotransferase) domain 1 1 308 - -
Bva06g00583 453 PANTHER CASEIN KINASE-RELATED 1 437 - -
Bva06g00583 453 MobiDBLite consensus disorder prediction 348 376 - -
Bva06g00583 453 MobiDBLite consensus disorder prediction 304 430 - -
Bva06g00583 453 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Bva06g00583 453 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00583 453 CDD STKc_CK1_delta_epsilon 8 282 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00583 Bva-Chr6 6050613 6054991 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00583 7 223 EF-hand Containing Proteins AT2G17890 26.222 3.09e-13 69.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Bva06g00583 Pkinase 1.1e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00583 K02218 - gmx:100785851 837.025
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01055 05 5430040 5435298 Bva06g00583 06 6050613 6054991 BWGD