Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00575 ATGAGATCGGTTGCTGTAGCCGTCAATGGTGGTTCCGCCGCCGGAGGCAAGGGTAGCCGACGAGCTGTCCAATGGGCGGTGGATAATCTTATGCCTCAAGCCGATAAGTTCATCTTAATTCACGTCATGCCCAAAATCACTTCAATTCCTACTCCATCCGGAGAGCTTATTCCCATTGAGAAAGTAGATGCCAGTGTGGCAGCAGCATATGTGCAGGATGtgaaagaaaagtttgaaCCAATCTTCATTCCATTTAAGAAACTATGTAAAACATGCGCAATGGAAACATTGCTGCTCGAAGATGACGATCCCGCAAGTGCACTTGTTAGATATACATCAGAGTCGGGGATCCAAGCATTAGTTATGGGCGCTTTctcctcaaattttattagaagGAAACTAAAAGGACCCGGAGTTCCAGCAACTGTTCTAAGATTTGCTCCTGACAATTGCGATGTTTATCTTGTATCTAGGGATAGAATTATATCAAAGTTAGCCGATACTTCACCATCTAGTGAGACTGGCCTTGGATCCTCCATGTCCAGTCGAAGGGATAATGGAGAAAATGGTACAAGCATTGGTAGAGAATTGTCTGGCCTTAAATCTTCCTCAACAGAatctaatattttcaaaaacctCAGATTTTCATCAATATCAGAGTGTAATTACGATTGGCAAACATCCAATGGAATGAGCTCTTTTACGAACGCCACAACAATTCAGGAAGGAAATCCTGAAAACCCTGGAGACGATGCTGAAACTATTAGTATCCATTCATTTGGTTCCATCCCTTCTGCACCGTATGAGCAgTTGACCATTCAAGAAGAAGTAGAAAAACTGCAGCTGGAGTTGCAGAATACCATGTCCATGTACAAACAAGTTTGTGAAGAGTTGGTTCATGCTCAAAACAAGGCCCTTTTACTTTCCTCCGAATGTCTTGAAGACACAAGAAGGGTAAATGCTGCCTTGGAAAGAGAGGATATCTTGAGAAAGATTGCAGCTGAAGAGAAAGCAAAACATTTAAAAGTCATGAAGGAACTTGAGGAGGCAAAAAATATGCTTGCTAAGGAGTCTTATGAAAGGCAGATAGCTGAATTGAATGTCCTTAAAGAATCCATAGAAAAACAGAGGATAATTGATACATTACTCTCAAAAGATAAGAGGTACAGACAGTATACCATGGATGAAATCGAGCAAGCGACAAACTTCTTCTCTGAGGATTTTGTAATTGGTGAAGGAGGGTATGGGAAGGTTTACAAGTGCAGTCTTGATCACACACCAGTAGCTGTAAAGATTTTGCATCAGGGTGCaattaacaagaaagaagAGTTTCTGAAGGagGTTGAGATTCTAAGTCAGCTTCACCATCCTCACATGGTTTTGCTGCTGGGAGCCTGCCCTGAAAATGGTTGCCTTGTTTATGAATACCTGGAAAATGGAAGCCTAGAGGATTATATTCCcagtaaaaatagaaaaacccCACTTCCCTGGTTCATTCGGTTCCGCATACTTTTTGAAGTGGCTTGTGGGCTCTCATTCTTGCATAATTCAAAACCAGAGCCTATTGTTCATCGAGATTTGAAACCTGGTAATATCTTGTTAGACAGGAATTATGTGAGCAAAATCGGAGATGTTGGATTGGCAAAATTCCTGTTAGACGTTGTGCCTGACAATATCACAGAGTACAGAGAATCAGTGCTTGCTGGTACTCTGCACTACATGGATCCAGAGTATCAGAGAACCGGCACTATTCGACCTAAATCAGATGTATACGCTTTGGGAGTTATAACTCTTCAGATGATAACATCTTGCCATGCACGTGGTGTCATTTTAACTGTTGAAAATGCAATTACAAATGACTCCTTCCGTGATATATTAGATAAATCAGCTGGAGATTGGCCATTGGCTGAGACAGAAGAACTGGCTCAAATTGCCCTAAAATGCTCGGCACTTAGATGTAGAGATAGACCAGATCTTGACACTGAAGTTCTCCCACTACTCAAACGACTTTCTGATGTTGCAAATGCAAGTGCAGAGttaggaagaaaaaatatatctccACCAAGTCAGTATTATTGCCCAATCCTTCAGGAAATAATGAATGATCCACATATAGCTGCTGATGGTTTTACTTACGAGTACAGAGCAATCAAGGCATGGCTTAGTAAACACAACGTGTCACCTGTGACAAAGCTTAGATTCCAGCATTCAGTGCTGACTCCAAACCACACTCTACGTTCTGCCATTCAGGAGTGGAGATCAGGTGTTACCTTCTACAATTA 2282 0.401 MRSVAVAVNGGSAAGGKGSRRAVQWAVDNLMPQADKFILIHVMPKITSIPTPSGELIPIEKVDASVAAAYVQDVKEKFEPIFIPFKKLCKTCAMETLLLEDDDPASALVRYTSESGIQALVMGAFSSNFIRRKLKGPGVPATVLRFAPDNCDVYLVSRDRIISKLADTSPSSETGLGSSMSSRRDNGENGTSIGRELSGLKSSSTESNIFKNLRFSSISECNYDWQTSNGMSSFTNATTIQEGNPENPGDDAETISIHSFGSIPSAPYEQLTIQEEVEKLQLELQNTMSMYKQVCEELVHAQNKALLLSSECLEDTRRVNAALEREDILRKIAAEEKAKHLKVMKELEEAKNMLAKESYERQIAELNVLKESIEKQRIIDTLLSKDKRYRQYTMDEIEQATNFFSEDFVIGEGGYGKVYKCSLDHTPVAVKILHQGAINKKEEFLKEVEILSQLHHPHMVLLLGACPENGCLVYEYLENGSLEDYIPSKNRKTPLPWFIRFRILFEVACGLSFLHNSKPEPIVHRDLKPGNILLDRNYVSKIGDVGLAKFLLDVVPDNITEYRESVLAGTLHYMDPEYQRTGTIRPKSDVYALGVITLQMITSCHARGVILTVENAITNDSFRDILDKSAGDWPLAETEELAQIALKCSALRCRDRPDLDTEVLPLLKRLSDVANASAELGRKNISPPSQYYCPILQEIMNDPHIAADGFTYEYRAIKAWLSKHNVSPVTKLRFQHSVLTPNHTLRSAIQEWRSGVTFYN 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00575 760 CDD STK_N 3 158 - -
Bva06g00575 760 Gene3D HUPs 1 162 IPR014729 -
Bva06g00575 760 SUPERFAMILY RING/U-box 681 753 - -
Bva06g00575 760 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 34 3 755 - -
Bva06g00575 760 PANTHER OS02G0152300 PROTEIN 3 755 - -
Bva06g00575 760 SUPERFAMILY Protein kinase-like (PK-like) 388 660 IPR011009 -
Bva06g00575 760 ProSitePatterns Protein kinases ATP-binding region signature. 410 431 IPR017441 GO:0005524
Bva06g00575 760 ProSitePatterns Serine/Threonine protein kinases active-site signature. 522 534 IPR008271 GO:0004672|GO:0006468
Bva06g00575 760 ProSiteProfiles Protein kinase domain profile. 404 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00575 760 Gene3D Transferase(Phosphotransferase) domain 1 477 685 - -
Bva06g00575 760 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 1 158 - -
Bva06g00575 760 Pfam U-box domain 688 753 IPR003613 GO:0004842|GO:0016567
Bva06g00575 760 SMART serkin_6 404 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00575 760 Gene3D Phosphorylase Kinase; domain 1 383 476 - -
Bva06g00575 760 SMART Ubox_2 690 752 IPR003613 GO:0004842|GO:0016567
Bva06g00575 760 CDD RING-Ubox_WDSUB1_like 691 731 - -
Bva06g00575 760 Pfam Protein tyrosine and serine/threonine kinase 409 660 IPR001245 GO:0004672|GO:0006468
Bva06g00575 760 ProSiteProfiles U-box domain profile. 686 759 IPR003613 GO:0004842|GO:0016567
Bva06g00575 760 MobiDBLite consensus disorder prediction 167 200 - -
Bva06g00575 760 Coils Coil 277 297 - -
Bva06g00575 760 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 686 757 IPR013083 -
Bva06g00575 760 Coils Coil 330 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00575 Bva-Chr6 6005964 6011699 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00575 3 754 Plant U-box Gene Family AT5G57035 54.922 0.0 855
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva06g00575 PK_Tyr_Ser-Thr 6.4e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00575 - - gmx:100805896 1112.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00575 06 6005964 6011699 Bva06g00575 06 6005964 6011699 ECH