Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00572 ATGGAGAATAGTAGGGAAGAGATTCAAATGGGTGGGGAGGAAGAGGACGAAGGACAGGTCGGTTCGAGCTTGACCATGGAAAGGGTGGCTGCTGCTAAGAAATTCATTGAGAACCATTACAGAGCCCAGATGAGGCACATCAAGGATCGCAAAGAGAGGCGTTCAGATCTGGAAAAGAAGTTAGCTTCTTCTCATGTAACAGAAGAGGAACAGCTTTATCTACTTAAAGCTTTAGAGCGGAAGGAGACTGAGTATATTCGGCTAAAAAGACACAAAATTTCTGTTGATGATTTCGACCTTCTAACAATTATTGGGAGGGGAGCCTTTGGAGAGGTGAGACTATGTCGGGAGAAGGAATCAGGTAATATTTTTGCCatgaaaaagttgaagaaatctGAAATGCTCAGCAGGGGGCAGGTTGAACATGTTAGAGCTGAAAGAAACTTGCTTGCGGAGGTCGCCAGTCACTGCATTGTGAAACTCTATTACTCTTTTCAGGATACTGAATACTTATATCTTATAATGGAGTACTTACCTGGTGGTGATGTGATGACTTTGCTGATGAGAGAAGAAACTTTGACTGAAACCGTGGCTAGATTTTACATTGCTGAAAGCGTTTTAGCTATAGAGTCTATTCATAGACACAACTATATTCACAGAGATATAAAACCTGACAACCTTCTACTGGACAAAAATGGTCATATGAAGCTTtctgattttggtctttgcAAGCCACTTGACTGCTCAAATTTATCAcctataaatgaaaatgaagtcCTAGATGATGAGAATTTGAATGATACCATGGACATTGATGACTCCTGCCCAAATATCAGAAGTGGAAGGCGCTGGAAAAGTCCTTTAGAACAACTTCAGCATTGGCAAATCAACAGGAGGAAGTTGGCATATTCCACAGTTGGAACTCCGGACTATATTGCTCCAGAAGTGTTACTGAAAAAGGGATATGGTGTGGAGTGTGACTGGTGGTCTCTTGGTGCTATAATGTATGAGATGCTTGTAGGTTACCCCCCATTTTACTCTGATGATCCAGTAACAACATGTAGAAAGATTGTGCATTGGAGAAATCACTTAAAATTTCCAGAGGAAGCAAGGTTGACACCTGTAGCAAAAGATCTGATATGTAGGTTGCTTTGTGATGTTGAACATAGGCTTGGCACAGGAGGAGCAGATGAAATTAAAGCTCATCCTTGGTTCAAAGATGTTGCATGGGAGAAAGTCTATGAAATGGAGGCAACATTCAAACCCCAAGTCAGTGATGAACTTGacactcaaaattttatgaaatttgatgagGTTGAACAACCAAAACCAGCTAGAACTGGATCTGGACCTATCAGGAAgATGCTGTTGACTGCTCAAGATCTTAGTTTTGTCGGCTACACGTATAAGAATTTTGATGCTGTCAAGGGTATGCTTCATTCTATCGATGGAAAAGATGGCATGTCACCGCAGCGGACATCCATAGATTCCACACAGAgTGATTCTGGAATAGACTATTCAACTCTTGACAGCACGAAAGCATA 1544 0.3951 MENSREEIQMGGEEEDEGQVGSSLTMERVAAAKKFIENHYRAQMRHIKDRKERRSDLEKKLASSHVTEEEQLYLLKALERKETEYIRLKRHKISVDDFDLLTIIGRGAFGEVRLCREKESGNIFAMKKLKKSEMLSRGQVEHVRAERNLLAEVASHCIVKLYYSFQDTEYLYLIMEYLPGGDVMTLLMREETLTETVARFYIAESVLAIESIHRHNYIHRDIKPDNLLLDKNGHMKLSDFGLCKPLDCSNLSPINENEVLDDENLNDTMDIDDSCPNIRSGRRWKSPLEQLQHWQINRRKLAYSTVGTPDYIAPEVLLKKGYGVECDWWSLGAIMYEMLVGYPPFYSDDPVTTCRKIVHWRNHLKFPEEARLTPVAKDLICRLLCDVEHRLGTGGADEIKAHPWFKDVAWEKVYEMEATFKPQVSDELDTQNFMKFDEVEQPKPARTGSGPIRKMLLTAQDLSFVGYTYKNFDAVKGMLHSIDGKDGMSPQRTSIDSTQSDSGIDYSTLDSTKA 514
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00572 514 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Bva06g00572 514 PANTHER SERINE/THREONINE-PROTEIN KINASE 12 510 - -
Bva06g00572 514 SUPERFAMILY Protein kinase-like (PK-like) 81 451 IPR011009 -
Bva06g00572 514 MobiDBLite consensus disorder prediction 1 22 - -
Bva06g00572 514 MobiDBLite consensus disorder prediction 487 514 - -
Bva06g00572 514 SMART serkin_6 98 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00572 514 PANTHER AGC (CAMP-DEPENDENT, CGMP-DEPENDENT AND PROTEIN KINASE C) KINASE FAMILY PROTEIN 12 510 - -
Bva06g00572 514 Gene3D Transferase(Phosphotransferase) domain 1 184 422 - -
Bva06g00572 514 SMART pkinase_C_6 406 471 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva06g00572 514 ProSiteProfiles Protein kinase domain profile. 98 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00572 514 ProSiteProfiles AGC-kinase C-terminal domain profile. 406 479 IPR000961 GO:0004674|GO:0005524|GO:0006468
Bva06g00572 514 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Bva06g00572 514 CDD STKc_NDR_like 96 470 - -
Bva06g00572 514 Gene3D Phosphorylase Kinase; domain 1 89 183 - -
Bva06g00572 514 Pfam Protein kinase domain 100 247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00572 514 Pfam Protein kinase domain 296 405 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00572 514 MobiDBLite consensus disorder prediction 483 514 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00572 Bva-Chr6 5989294 5996514 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00572 15 511 AGC Kinase Gene Family AT2G19400 78.357 0.0 796
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Bva06g00572 Pkinase 1.6e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00572 K08790 - qsu:112002188 843.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00572 06 5989294 5996514 Bva06g00572 06 5989294 5996514 ECH