Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00570 ATGGAGGAAATATCTTCGACGGTTTCAGTCCCATTCACAATTGgtaatttgattcaaaagGAATCAGCAGTGGCAACCCACATAGAAATAACTGGGCTAAAATTTATGGCAATATTAAGCCCTGCTAGGGAAGATTGCGAATCATGCTCTGGTGGAAGTGAAAATCTCCCAGATATTAATCCACAGCATAAAATTGCAGTTTCTGCAAGGGAAAACGATAAGTGGGTAGGAGCAGCCCCTGCTTCAGAGATGACTGTTGAAACAGATGGCAATCAGATCTTGAGGGAAACCCCTTATCAGAAAGGGAAGGAAGATGAATACATGTTAGCAGTTGATGATTCATGCTCACAATCTTTGTCTAATAACACCAGCAATCTCTATGGCAGGAAGTCTTCTGAGGTTGATTCACCTATTACCATGGGGATCAATGATAAAATCACACCCTTAGAGCCAGTACAGAACATGTCTTCTATTGCAATGGATTTAGAGAGTGAGGATAGCAGTGGATCAGATGGGTCTGATCCAAAAGCACCTTCTGTACTTCTTGATGTGCCAGAGGAGAAGAAAGTATGCAGAACAAGCTGCCAGAATGATTCGCAATTGAGTGCTGGCCCTCTTTGGGGTTTCTCATCTGTTTGTGGAAGGAGACAGGAGATGGAAGATGCTGTTGCTGTAGTGCCCCAACTTCTGCAGATCCCTTCACATATGCTTATGGATGATCATGTAAATGAAAACACAAAATCTCATGTAGCCCACTTTTTTGGTGTTTATGATGGACATGGGGGCTCTCAGGTAGCTAATTATTGCCGGGAGCGTCTCCATTCAGTGTTGATTGAGGAAATAGAAGGTGCAGAATCAAGTTTGGCTGCAAAAAATGGGGAAGAAAACTTGCAGGAGCATTGGAAGAAGGCATTCTCTAATTGTTTTGAGACTGTTGATTCTGAGGTTGGAGGAGGTAGTgcagatgatgatgaaagcAACACTGATGCGTCTGAGCCTATCATTGAACCTCTTGCCCCTGAAACTGTTGGTTCTACAGCCGTGGTTGCCATTTTAAGTCAAACACACATAATAGTTGCAAACAGCGGGGATTCAAGAACAGTGCTGTATCGTGGAAAAGAAGCCATCCCGTTGTCTGCTGATCACAAACCAAATAGAGAGGATGAGTGGGCAAGGATAGAAGCTGCAGGAGGAAGGGTCATACAGTGGAATGGGTACCGGGTTCTTGGTGTTTTGGCAGTGTCAAGGTCCATAGGTGACAGATACTTGAAACCATGGGTTATTCCAGATCCTGAAGTCAAGTTTATTCGTCGAGAGAAAAATGACGAGTGCCTTATTCTAGCTAGCGATGGTCTGTGGGATGTCATGACCAACGAGGAAGCCTGTGAGATAGCACGAAAGCGCATCCTTCTTTGGCACAAGAAGTATGGCAATGATGTTAACGTAGCAGCTCGAAAACACGATGGAGTTGATCCTGCAGCACAGTCTGCTGCAGAGTATCTATCTAGCTTTGCACTCCAAAGAGGAAGCAAAGATAACATCTCTGTTATTGTCATAGATTTGAAGgctcaaagaaaatttaagagaaaagtaTA 1595 0.4238 MEEISSTVSVPFTIGNLIQKESAVATHIEITGLKFMAILSPAREDCESCSGGSENLPDINPQHKIAVSARENDKWVGAAPASEMTVETDGNQILRETPYQKGKEDEYMLAVDDSCSQSLSNNTSNLYGRKSSEVDSPITMGINDKITPLEPVQNMSSIAMDLESEDSSGSDGSDPKAPSVLLDVPEEKKVCRTSCQNDSQLSAGPLWGFSSVCGRRQEMEDAVAVVPQLLQIPSHMLMDDHVNENTKSHVAHFFGVYDGHGGSQVANYCRERLHSVLIEEIEGAESSLAAKNGEENLQEHWKKAFSNCFETVDSEVGGGSADDDESNTDASEPIIEPLAPETVGSTAVVAILSQTHIIVANSGDSRTVLYRGKEAIPLSADHKPNREDEWARIEAAGGRVIQWNGYRVLGVLAVSRSIGDRYLKPWVIPDPEVKFIRREKNDECLILASDGLWDVMTNEEACEIARKRILLWHKKYGNDVNVAARKHDGVDPAAQSAAEYLSSFALQRGSKDNISVIVIDLKAQRKFKRKV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00570 531 ProSiteProfiles PPM-type phosphatase domain profile. 206 521 IPR001932 -
Bva06g00570 531 Pfam Protein phosphatase 2C 208 514 IPR001932 -
Bva06g00570 531 CDD PP2Cc 208 521 IPR001932 -
Bva06g00570 531 SMART PP2C_4 196 519 IPR001932 -
Bva06g00570 531 PANTHER ALPHABET, ISOFORM E-RELATED 115 530 - -
Bva06g00570 531 SUPERFAMILY PP2C-like 205 522 IPR036457 -
Bva06g00570 531 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 115 530 - -
Bva06g00570 531 ProSitePatterns PPM-type phosphatase domain signature. 253 261 IPR000222 GO:0043169
Bva06g00570 531 Gene3D - 195 531 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00570 Bva-Chr6 5968082 5974143 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00570 183 530 PP2C-type Phosphatase Gene Family AT4G26080 59.207 2.56e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00570 K14497 - gmx:100789207 610.142
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01068 05 5494812 5498932 Bva06g00570 06 5968082 5974143 BWGD
Bva06g00570 06 5968082 5974143 Bva06g00570 06 5968082 5974143 ECH