Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00569 ATGAAGAAAGGAAGCTTAGGCCCCAGTCTCAAGCTCGTGGTTCCTGCATCCGATCAGGTTTCTTTCGCCAAGTTCCTGACTCAAAGTGGGACCTTTAAGGATGGGGATCTGCTTGTCAACAGAGATGGAGTTCGAATTGTCTCTCAAAGCGAAGTCGAAGCTCCCCCACCTATCAGGCCACTAGACGACCAGTTAAGTTTGGCGGATATCGACATAATCAAAGTGgttggaaaaggaaatggtGGAATAGTGCAGTTGGTGCAACACAAATGGACTAATCAGTTTTTTGCATTAAAGGAGATTCAAATGAACATTGAGGAGTCTATGCGGAAACAGATAGCCCAAGAACtgaaaattaatcaatcagCTCAATGCCCTTATGTTGTTGTCTGGTACCAGTCGTTCTATCATAATGGAGTCATATCTATCATCTTAGAGTACATGGATGGTGGATCTTTAGCAGATTTTTTGAAGAACGTTAAAACAATACCAGAGTCATATCTTGCAGCCATCTGTAAGCAGGTGCTGAAGGGCTTAATGTATCTTCACCATGAAAGACATATTATTCACAGGGACTTAAAGCCTTCTAATTTACTGATAAATCATAGAGGGGAAGTAAAAATCACTGACTTTGGTGTGAGTGCGATTATGGAAAATACATCTGGTCAAGCAAATACTTTCATTGGCACCTACAACTATATGTCTCCAGAGAGAATCAATGGAAGCCAGAAAGGCTACAACTACAAAAGTGATATATGGAGTTTAGGACTGATATTGCTCGAGTGTGCTATGGGAAGGTTTCCATATACACCCCCAGATCAAGGTGAAATTTGGGAAAGTATTTTTGAACTTATTGAAGCTATTGTCGATCAACCTCCTCCTTGTGCTCCGGCTGATCAATTTTCCCCACAGTTCTGCTCATTTATCTCAGCATgCTTACAGAAAGACCCAAGAGACAGGCTATCGGCTCAGGAACTGTTGAGGCATCCTTTTCTCGCCATGTATGAAGACGTGGATTTGGATCTCTCAGATTACTTCACCAATGCAGGATCTCCCCTTGCAACCTTATA 1070 0.4093 MKKGSLGPSLKLVVPASDQVSFAKFLTQSGTFKDGDLLVNRDGVRIVSQSEVEAPPPIRPLDDQLSLADIDIIKVVGKGNGGIVQLVQHKWTNQFFALKEIQMNIEESMRKQIAQELKINQSAQCPYVVVWYQSFYHNGVISIILEYMDGGSLADFLKNVKTIPESYLAAICKQVLKGLMYLHHERHIIHRDLKPSNLLINHRGEVKITDFGVSAIMENTSGQANTFIGTYNYMSPERINGSQKGYNYKSDIWSLGLILLECAMGRFPYTPPDQGEIWESIFELIEAIVDQPPPCAPADQFSPQFCSFISACLQKDPRDRLSAQELLRHPFLAMYEDVDLDLSDYFTNAGSPLATL 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00569 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00569 356 Gene3D Transferase(Phosphotransferase) domain 1 150 351 - -
Bva06g00569 356 SUPERFAMILY Protein kinase-like (PK-like) 66 338 IPR011009 -
Bva06g00569 356 Gene3D Phosphorylase Kinase; domain 1 49 149 - -
Bva06g00569 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 356 - -
Bva06g00569 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00569 356 CDD PKc_MAPKK_plant_like 68 336 - -
Bva06g00569 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
Bva06g00569 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Bva06g00569 356 PANTHER MAP KINASE KINASE 1 356 - -
Bva06g00569 356 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00569 Bva-Chr6 5965906 5969583 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00569 1 327 MAP Kinase Kinase Gene Family AT4G29810 69.345 1.43e-176 492
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Bva06g00569 Pkinase 1e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00569 K20603 - gmx:100789734 618.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01069 05 5498492 5502975 Bva06g00569 06 5965906 5969583 BWGD
Bva06g00569 06 5965906 5969583 Bva06g00569 06 5965906 5969583 ECH