Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00566 ATGGTTTGGTTTCAATGCGAGGATTGTGGAGACAACCTGAAGAAGCCCAAGTTGCCGAATCATTTCAGAACCTGCTCCGCTCATAAgTTGTCATGCATTGACTGTGGAGAAATATTTAGCAGAGACACTGTTCAGGACCATACGCAATGTATTACCGAAGCGGAAAAGTATGGTCCTAAGGGCCAAGGTAAATCTTTGAATGTTTCAACTGTCAAGCCTAACAAGGAAGCCAAGCAACGACCTGAAGTTGATATCAATGTTGGGTTATCTGATCGACCTCCATGGTTTTGTAGTCTTTGCAATACAAAAGCTACAAGTAAGCAAACAATTCTTCTCCATGCTGATGGAAAGAAACACAGGGCCAAAGCCCGAGCTTTCCATGCTGCCAACCAACAACCAAACCCAACAGACAAATCTAATCCTGATGAGAAGCATGCGGTGGACAATGCCCCTAATGATGAAGGACAAGAAGTAAAAAAAGTAGAGCAGCCAAAATTGCAAGATCCATCTGAACATGATGACTTGAAGCCACAGGATGGAATTTCtccatcaaagaaaaagaggaaaccTGATCCATTGGAGGATAAACCTACGGGTAAAAAGAGCAAGGACAACGCTTCAGGTGATATGGGAAATGGGGAAGTAATTCAAGTGAAAAGAGCAGAAGAAGCAGGAAAAGAGAGTCGTTTGAAGAAAGATAACATCATAGAATCTGGCTGCACAAATGGCGTCAAGAATAAGATAAAGTGGAAGAAGTTTATCAAATCGGCCTTGAAATCTCAACCTGATGGAActttgaagatgaagaaactgAGAAAACTTGTCCTCAAAGCTCTGCAGGAATCTGGAATTGTAGTAGATGAAACTGAACTTAGTGAGGCACTTCAGCAAAAGATCAATTCAAGCTCAAGATTTGCACTTGAGAACAAGTACGTGCGTTTGGTTGCCAATGATTG 956 0.4006 MVWFQCEDCGDNLKKPKLPNHFRTCSAHKLSCIDCGEIFSRDTVQDHTQCITEAEKYGPKGQGKSLNVSTVKPNKEAKQRPEVDINVGLSDRPPWFCSLCNTKATSKQTILLHADGKKHRAKARAFHAANQQPNPTDKSNPDEKHAVDNAPNDEGQEVKKVEQPKLQDPSEHDDLKPQDGISPSKKKRKPDPLEDKPTGKKSKDNASGDMGNGEVIQVKRAEEAGKESRLKKDNIIESGCTNGVKNKIKWKKFIKSALKSQPDGTLKMKKLRKLVLKALQESGIVVDETELSEALQQKINSSSRFALENKYVRLVAND 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00566 318 MobiDBLite consensus disorder prediction 219 234 - -
Bva06g00566 318 SUPERFAMILY beta-beta-alpha zinc fingers 1 26 IPR036236 -
Bva06g00566 318 SUPERFAMILY beta-beta-alpha zinc fingers 30 58 IPR036236 -
Bva06g00566 318 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 1 26 - -
Bva06g00566 318 PANTHER CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR 1 315 IPR039999 GO:0003677
Bva06g00566 318 SUPERFAMILY beta-beta-alpha zinc fingers 88 131 IPR036236 -
Bva06g00566 318 MobiDBLite consensus disorder prediction 138 203 - -
Bva06g00566 318 Pfam LYAR-type C2HC zinc finger 30 57 IPR014898 -
Bva06g00566 318 Gene3D Classic Zinc Finger 89 131 - -
Bva06g00566 318 MobiDBLite consensus disorder prediction 114 236 - -
Bva06g00566 318 ProSiteProfiles Zinc finger C2HC LYAR-type profile. 27 51 - -
Bva06g00566 318 SMART ZnF_U1_5 92 126 IPR003604 GO:0003676|GO:0008270
Bva06g00566 318 Pfam Zinc-finger of C2H2 type 95 119 - -
Bva06g00566 318 Gene3D - 1 50 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00566 64 214 C2H2 Transcription Factor Family AT2G19380 39.735 3.14e-18 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00566 K15263 - gmx:100790272 435.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00566 06 5952073 5954729 Bva06g00566 06 5952073 5954729 ECH