Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00555 ATGCTGACATGCATAGCTCGTCCAAAGAAACCCGGGAATGACTCACTGAGCCAGCCCGATGAATCGGACTCTGACAACCCAGCTAAAACTCAAGCCATTAAATCCCTCACTTCTCAGCTGAAGGATATGGCGTTGAAGGCATCGGGGGCTTATAAGCATTGCAGCCCGTGCACAGGGCCGGCGACACAGGGACGAACCCGTAGCAATACCGAATCCGACGGCGATTCGGATCGGTTCCGATGGTCGTACCGGAGAACGGGGAGCTCGAGCTCGACGACGACGAGAACTTGGGGGAAGGAGATGGAAGCAAGGCTGAAAGGAATATCAAGCGGAGAAGGGACGCCGAACTCCGCCAGTGGCCGCCGCGTGGAACCGGTGGTGCTGTTCGTTGAAGAGAACGAACCGAAAGAGTGGGTGGCGCAGGTGGAGCCGGGGGTTTTGATCACTTTTGTTTCGCTTCCGCGTGGCGGGAATGATCTGAAGCGAATACGATTCAGTCGGGAGATGTTTAACAAAGGGCAAGCTCAAAGATGGTGGGCAGAGAACTATGACAGGGTCATGGAACTTTACAATGTTCAAAGGTTAAATCGTAATGCTTTCCCTCTTCAAACGCCGCCAAGATCCGAAGATGAGAGCTCAAAGCTTGAATCAGCAGAAGACAGTCCTGTAACACCTCCGCTAACCAGAGAACGATTACCCCGAAATCTATACCGTCCATCAGGGTTGGGAATGGGATATTCATCGTCAGATTCATTTGACCATCAATCAATGCAATCTCGGCATTTCTATGACTCTGGTGGTCTCAACTCAACCCCCAAAGTGTCCACCATTAGCGCAGCCAAGACAGAGATATCATCAATGGACACTTCTATCAGAAGTAGCTCATCCAGGGATGCAGATCGCTCCTGTGATATATCAATCAGCAATGCCAGTGACCTCGAAACTGAATGGGTTGAACAAGATGAACCTGGGGTTTATATTACCATCAGAGCACTGCCAGGTGGCAAAAGAGAGCTCAGAAGAGTCAGATTCAGCCGAGAAAGATTTGGGGAAGTTCATGCTAGATTATGGTGGGAAGAAAACCGAGCTAGAATACATGAACAATACTTATG 1112 0.5018 MLTCIARPKKPGNDSLSQPDESDSDNPAKTQAIKSLTSQLKDMALKASGAYKHCSPCTGPATQGRTRSNTESDGDSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRVEPVVLFVEENEPKEWVAQVEPGVLITFVSLPRGGNDLKRIRFSREMFNKGQAQRWWAENYDRVMELYNVQRLNRNAFPLQTPPRSEDESSKLESAEDSPVTPPLTRERLPRNLYRPSGLGMGYSSSDSFDHQSMQSRHFYDSGGLNSTPKVSTISAAKTEISSMDTSIRSSSSRDADRSCDISISNASDLETEWVEQDEPGVYITIRALPGGKRELRRVRFSRERFGEVHARLWWEENRARIHEQYL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00555 370 MobiDBLite consensus disorder prediction 1 99 - -
Bva06g00555 370 MobiDBLite consensus disorder prediction 200 240 - -
Bva06g00555 370 ProSiteProfiles BRX domain profile. 136 191 IPR013591 -
Bva06g00555 370 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 370 - -
Bva06g00555 370 Pfam Transcription factor BRX N-terminal domain 26 57 IPR027988 -
Bva06g00555 370 ProSiteProfiles BRX domain profile. 315 370 IPR013591 -
Bva06g00555 370 MobiDBLite consensus disorder prediction 83 98 - -
Bva06g00555 370 Pfam Transcription factor regulating root and shoot growth via Pin3 136 190 IPR013591 -
Bva06g00555 370 Pfam Transcription factor regulating root and shoot growth via Pin3 314 369 IPR013591 -
Bva06g00555 370 MobiDBLite consensus disorder prediction 15 42 - -
Bva06g00555 370 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 370 IPR044532 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00555 Bva-Chr6 5885341 5890868 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00555 1 370 Major Intrinsic Protein MIP AT1G31880 44.703 7.03e-93 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00555 - - gmx:100794109 610.912
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01088 05 5587969 5592569 Bva06g00555 06 5885341 5890868 BWGD
Bva06g00555 06 5885341 5890868 Bva06g00555 06 5885341 5890868 ECH