Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00551 ATGGAAGTAGAAAGAGGCGTGTCTGACAAGAAAGGGAGAAAGAAGGATGTGATTTTGCAAATTTCGGACACTGAACAAGCTTTCTACGCAAACAATGAAAGCCCTGGATTTAGAGGTTCTCCAAAACCCGAAATCAGTTCCAACTCCTTTCAGCAATATACCCAGATGGATTCTTCGTCGAAAGGGTTGGGCGAAATTCCGACGAGTACAAGGTCGCCGTCGCCAGAGGTGAGGAAATTGAGCCCGGAACCCAGTAAACCCCCTAAATATCCAAGAGAATCAATAACTAGAAGGCGGGTGCTGGGTAAGTCAGAGTTTTCAAAGCCAAAATCGAGATTGGTGGAGCCAGCACATCGAATTGACTCCAAGCAGCTTGATGAAAAGACGCAATCGGCGAATTCAAACTTATCTAGTAGGAGTTCTCCCATCATGGCTTCACCTAAATCCAAAGTTACAGGTGCTAGTTCAAAAGGTGACAGAACTCCAATTACCCCACGAACGCCTTTGATTGGGCCATCtggagaagatgaagaagatgacgAAGAAGTGTACAAAACTGCAAATCTGAGAATGAGCCAGATAAGATCAAGTAAGAACTGGAAGCTCGCTGTTTTGACTGAGTGGATTGCTTTTGTTTGCATTATGGGGATTTTTATTGCAAGCTTGACTATTGATAAGTTGCAGAACACCGTGCTTTGGAGTTTGGGATTATGGAAATGGTGTGTGCTGGCATTGGTTATCCTTTGTGGTAGATTGGTTACAGAATGGTTAATACATGTTCTGGTTTTTATGATGGAGAGGAACTTCTTGTTTAAGAAGAAAGTTCTGTATTTTGTTTATGGGGTAAAGAAGAGTGTTCAGGTCTttatttggttaagtttgattcTTCTGGCGTGGGGTTTGTTGTTCAACCATGGAGTCAAGAGACCCAGAAGAACTACTAGGATTCTTAATTATATCACTAGAGCCCTTGCTTCTTGTCTTATTGGGGCAGCTATATGGTTAGCGAAAACTTTGTTGATAAAGCTAGTGGCTGCTTCTTTCCAATCCACTAGATTCTTTGACAGGATTCAAGAATCACTCTTTCATCAGTACATTCTTCGGACGCTTTCGGGGCCCTCCTTGATGGAGGTGGCTGAAATGGTAGGCCAGACTTCAAGTATTGGCAGATTGAGTTTCACTACTTTGAACAAAAATGATGTACCTACGAAAGAAGAAGTCATTGATGTAGACAagctcaaaaaaattaaacaagagaAAGTTTCTGCTTGGACTATGAAAGGATTAGCCGATGTGATAAGGAGTTCTGGACTAACCTGCACCTCTGCACcaagtgatgatgatgaagatggcGAGCAGAAAGACAGAGAAATTACTAGTGAGTTGGAAGCAAGGGCAGCTGCTTATGGAATTTTCAGGAATGTTGCCAAGCCAGGACACAAGTACATTGATGAGGAGGACCTCTTGCGCTTcatgaaaagagaagagatggaCAATATGCTTCCACTATTTGAAGGAGCAGTTGAAACTGGAAAAATCAAGAGGAAGTCTCTAAAAAACTGGCTGgTTAAAGTTTACCTTGAACGACAGTCACTGGTGCATTCCTTAAATGATGCCAAAACAGCTGTTGAGGAGTTGAACAAGCTAGCTTCAGCTATTGTCCTTGTTATCATAATCATCGTATGGTTACTTGTAATGGGATTCTTGACAACCCAAGTGCTTGTCTTCATTTCATCTCAGTTTTTGCTTGTGGTGTTTATGTTCGGCAACACTGCGAAGACTGTATTCGAAgctattatatttgttttcgTGATGCACCCATTTGATGTTGGCGATCGTTGTGTCATTGAAGGTGTACAGATGGTTGTTGAAGAGATGAACATACTGACTACAGTCTTCTTGAGATATGACAACGAAAAGATATTCTATCCAAATTCGGTTCTGGCAAGCAAACCCATCAGCAATTTCTACAGGAGTCCAGAGATGGGTGATTCAGTCGAATTTGATGTCGATGTTTCCACCTCAATTGATAGCATTGGAAAATTGAAATCTATGATCAAAACataCTTGGACAGCAAACCTCAACACTGGCGTCCGGACCATAGTGTATTAGTCAGAGATTTTGCAGACGTAAACAGGATGAAAATGGGTCTCTATGTTACTCATACCAtaaattttcagaattctGGGGAGAAGGGCAACCGAAGATCTGACTTGGTCTtggaattgaagaaaatattcgAAAAActtgatattaaatatcatcTACCACCACAAGAAATTCATCTCAAACATCTTGACCCCCCTGCACCCTCCACATTTCAACAAGTTTGGTCATG 2339 0.3895 MEVERGVSDKKGRKKDVILQISDTEQAFYANNESPGFRGSPKPEISSNSFQQYTQMDSSSKGLGEIPTSTRSPSPEVRKLSPEPSKPPKYPRESITRRRVLGKSEFSKPKSRLVEPAHRIDSKQLDEKTQSANSNLSSRSSPIMASPKSKVTGASSKGDRTPITPRTPLIGPSGEDEEDDEEVYKTANLRMSQIRSSKNWKLAVLTEWIAFVCIMGIFIASLTIDKLQNTVLWSLGLWKWCVLALVILCGRLVTEWLIHVLVFMMERNFLFKKKVLYFVYGVKKSVQVFIWLSLILLAWGLLFNHGVKRPRRTTRILNYITRALASCLIGAAIWLAKTLLIKLVAASFQSTRFFDRIQESLFHQYILRTLSGPSLMEVAEMVGQTSSIGRLSFTTLNKNDVPTKEEVIDVDKLKKIKQEKVSAWTMKGLADVIRSSGLTCTSAPSDDDEDGEQKDREITSELEARAAAYGIFRNVAKPGHKYIDEEDLLRFMKREEMDNMLPLFEGAVETGKIKRKSLKNWLVKVYLERQSLVHSLNDAKTAVEELNKLASAIVLVIIIIVWLLVMGFLTTQVLVFISSQFLLVVFMFGNTAKTVFEAIIFVFVMHPFDVGDRCVIEGVQMVVEEMNILTTVFLRYDNEKIFYPNSVLASKPISNFYRSPEMGDSVEFDVDVSTSIDSIGKLKSMIKTYLDSKPQHWRPDHSVLVRDFADVNRMKMGLYVTHTINFQNSGEKGNRRSDLVLELKKIFEKLDIKYHLPPQEIHLKHLDPPAPSTFQQVWS 779
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00551 779 MobiDBLite consensus disorder prediction 127 162 - -
Bva06g00551 779 MobiDBLite consensus disorder prediction 31 182 - -
Bva06g00551 779 Gene3D - 607 656 IPR023408 -
Bva06g00551 779 MobiDBLite consensus disorder prediction 82 126 - -
Bva06g00551 779 MobiDBLite consensus disorder prediction 41 76 - -
Bva06g00551 779 PIRSF Memb_At2g17000 2 778 IPR016688 -
Bva06g00551 779 SUPERFAMILY Sm-like ribonucleoproteins 597 656 IPR010920 -
Bva06g00551 779 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 11 765 IPR016688 -
Bva06g00551 779 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 11 765 - -
Bva06g00551 779 Pfam Mechanosensitive ion channel 548 753 IPR006685 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00551 Bva-Chr6 5870061 5873917 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00551 59 763 Mechanosensitive Ion Channel Family AT5G12080 50.914 0.0 725
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00551 K22048 - tcc:18588316 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00551 06 5870061 5873917 Bva06g00551 06 5870061 5873917 ECH