Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00545 ATGGGGAGAAGCCCTTGTTGCTTGAAAGAGGGCTTGAACAGAGGTGCTTGGACTGCTCACGAAGACAAGATCCTCACCGAGTACATTACAGTCCATGGCGAAGGAAGATGGAGAAACCTTCCCAAAAGAGCAGGTTTGAAGAGATGTGGGAAAAGTTGCAGGCTGAGATGGTTGAATTATCTAAGACCAGATATCAAGAGAGGTAATATCTCCCCAGATGAAGAAGAGCTTATTATCAGGCTTCACAAGCTGTTGGGAAACAGATGGTCTCTAATAGCAGGAAGGCTTCCAGGGCGAACagacaatgaaataaaaaattactggAATACCAATTTAggtaaaaaagttaaagacCATCCTCACCAAACCAACGCTTCATCTCGAAAAGCATTCTCTGTTCAACCAGATCACGAAAACAAGCCAAAGAATCCAAAGACCAACAAAGCGCCACCAATGTCTTCTAAGCTGGAAGCCCAGGTTGTCCGTACAAAAGCAACAAAATGCTCTAAGATATTCATAAACCCCCATCCTCCTTACTCTTCCGTACTCCATGAGTTGCAGAACAATTCAAAGCCAGAAAAAGCAGAAGCAGATGAGCCATTGCTGGTGAATGATGCTTCTGCTGCTACAAACAACGTTAATGTTTCAGCAGGTTTCCAAATGGAACTCGACAAGTTCGACGATGGGCTTTTGTCGTTTAGTGGAAAAGAAGAACTTTCTTCTCCAGATTTGCTCATAGATTTCAACATGGGAGAGATATGCCTGTCTGATCTTCTTAACTCAGATTTCTCAGATGTGTATGACTTCAGTTACAGTAACAATAACAGCGATGAGCTATCGCTGTCGCCTTCAACAGAGGAACCTTTGCTGTTCTCTGACGAGCTTCTCAAGGACTGGACACAGAGCGATTTTGTCCAGAGTGAAACAGACTTGGCTAATAATCTTCAATCCTTCACTTCTTTTCTCGAGTCTGCTGAGGAAGGAATAAGCGGAGAACAATA 1001 0.4206 MGRSPCCLKEGLNRGAWTAHEDKILTEYITVHGEGRWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISPDEEELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTNLGKKVKDHPHQTNASSRKAFSVQPDHENKPKNPKTNKAPPMSSKLEAQVVRTKATKCSKIFINPHPPYSSVLHELQNNSKPEKAEADEPLLVNDASAATNNVNVSAGFQMELDKFDDGLLSFSGKEELSSPDLLIDFNMGEICLSDLLNSDFSDVYDFSYSNNNSDELSLSPSTEEPLLFSDELLKDWTQSDFVQSETDLANNLQSFTSFLESAEEGISGEQ 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00545 333 Gene3D - 14 66 - -
Bva06g00545 333 CDD SANT 16 61 IPR001005 -
Bva06g00545 333 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bva06g00545 333 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bva06g00545 333 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bva06g00545 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bva06g00545 333 SMART sant 66 114 IPR001005 -
Bva06g00545 333 SMART sant 13 63 IPR001005 -
Bva06g00545 333 Gene3D - 70 147 - -
Bva06g00545 333 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bva06g00545 333 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 281 - -
Bva06g00545 333 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bva06g00545 333 CDD SANT 71 112 IPR001005 -
Bva06g00545 333 MobiDBLite consensus disorder prediction 113 156 - -
Bva06g00545 333 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Bva06g00545 333 PANTHER TRANSCRIPTION FACTOR TT2 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00545 Bva-Chr6 5835584 5837003 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00545 1 148 MYB Transcription Factor Family AT2G47460 58.784 1.22e-60 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva06g00545 Myb_DNA-binding 1.1e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00545 K09422 - gmx:100802704 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00545 06 5835584 5837003 Bva05g01101 05 5676798 5678307 BWGD
Bva06g00545 06 5835584 5837003 Bva08g02092 08 13857694 13858718 ECH
Bva06g00545 06 5835584 5837003 Bva02g02231 02 22364613 22366332 ECH
Bva06g00545 06 5835584 5837003 Bva10g00513 10 4921834 4923144 ECH
Bva06g00545 06 5835584 5837003 Bva06g00545 06 5835584 5837003 ECH