Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva06g00510 | ATGAGGACCAGCTTCTTCAATGTAAGcatctataaaataaactgTGGGCTGTTCTATGGGATCATTGAGTACTACTATCCCACAAATGGCAAGACGTTTGCACAGCTAACTTTTCCAATTTCTGCACATTGCGATGCAGCACACGAAAACCTTGGATCAAAGCTCtgcattctcatttttctttctgtagcACGAATTGGAATTGAAATGCAGAAGTCGACTTTGCCACTGAAGAACGTGAAAAACGCGAATGAGAATAAGAAGAAGTTATTACACAGCAAGGAAGCATTGGTGAAGCTTTTAAGATGGCATTTTGGGTACCCTGAGTTTAGAGGCAAGCAATTGGATGCTATTCAAGCTGTACTCTCAGGCAGAGATTGTTTTTGTCTCATGCCAACTGGAGGAGGCAAGTCAATGTGTTATCAAATCCCTGCATTGGCTAAGACAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGCGTTGATGGAAAACCAAGTGATGGCATTAAAGGAAAAAGGCATTGCTGCCGAATATCTCTCCTCAACACAAACAACAGATGCAAAAAATAAGATTCATGAGGACCTTAATTCTGGAAAGCCTTCTATAAGGCTGCTCTATGTGACTCCAGAAATGATAGTGACGCCAGGGTTTATGTCAAAGCTGACAAAGATTTATGCGAGGGGGTTATTGAGTCTGATTGCAATAGATGAGGCACATTGCATCTCAACTTGGGGCCATGATTTCAGACCTAGCTATCGTAAGCTTTCATCTCTGAGAAGCCATGTCTCAGACGTTCCAATATTGGCTCTGACTGCAACTGCTGCCCCTAAGGTTCAAAAGGATGTGGTAGAATCCTTGCAGCTGCACAAcccattaatattaaaatcttcttttaatcgtgctaatatatattatgaagTTCGGTACAAAGATCTTTTGGATGACACGTATGCTGATTTATCTAATATGCTCAAATCTAAGGGAAATGTCTGTGCTATAGTTTACTGCCTTGAACGTTCAACATGCGATGATTTGTCTGCTTATCTATCTCAAACTGGCATTTCCTGTTCTGCTTATCACGCTGGCTTGAATAATAAAGTTCGAACTTCTGTGTTAGATGATTGGATTTCTTCTAAGATACAATTACTGAGCTATTGGTGTTCATTCAGAATGGGCATTGATAGAAAGGATGTCAGAATTGTGTGCCATTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCAGGAAGAGCTGGTCGTGATCAATTGCCCTCAACAAGTCTGTTATACTATGGAGTAGATGATCGTAAAAGAATGGAATTCATATTAAGCAATTCTGGAAGTAATAAATCAAGGCCGTCAAGCTCACAAGAAGAATCATCTAAAAGGTCCCTGACTGACTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGCCGAAGGAAAAAGATTCTCGAGAGTTTTGGTGAACAGGTGAATGCATCACTATGCGGGAAAACATGTGATGCCTGCAGACATCCAAACTTAGTTACCAGATATTTGGAGGATCTCAGAACAGGATGTGCTTTTCGCCAGAGAAATGGCTCCTCTCGAGTTTTTATTAATAGCTCCACAGGTGCAGTTGATGAGGAGCAGTTATCTGAATTCTGGAATCGTGATGAGGAAGCAAATGTATCAGAGGAAGATATATCTGATTCTGATGATTGTAATGAGGCTGTCACCAGCCTTGCCAGGTCAAAGTCCCAATCCAGACTGGGAATAAATGAGAGGATTGCATTATTGCAGCGtgcagaagaaaatttttgtcgAAATGAAAACAATGACAAACAGAACAACAAAGTTGACAAGAATGCTATATCTGATACAATCCGAGGAGCAAGCAGGGAAAGATTTCAAAATGCTCTAAAGCAGGCTCTGCAACGGCTTGAAGACTTAAAAATTGAAGTGGAAACATCAGCATATTTGCTTGAAGATGATTGctataaaaaatatggaaaGGCTGGGAAGTCATTCTATTATTCACAAGTGGCAAGTACTGTAAGGTGGCTGTCAACTGCAAATTCTACTGATCTGATAAATCGACTTAGAGTTAATGATGCTTCCCCATCAATGAATGCCTTGTCTGAAGCTGAATACACAACTATAACACCCTCTTCGGCAGATCATTGTGCAAAGGAAGCCGCTAGCAATGCTAGATCAGAAACGTCATGTGCTTTGCCTATTGAAAGTGCTTCCTTTAATACAAAGTTGCCAGCAATTCCATCTTTCTCTGAGTTTGTCAATAGTAAGAAGGCAAAGGGCAACCAACTAAACACCTCACAGAAGCGCTCACAAGACAAGTCCATAAAGACCGCCGAGAAGAGGATGAAGTTATA | 2384 | 0.3888 | MRTSFFNVSIYKINCGLFYGIIEYYYPTNGKTFAQLTFPISAHCDAAHENLGSKLCILIFLSVARIGIEMQKSTLPLKNVKNANENKKKLLHSKEALVKLLRWHFGYPEFRGKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKTGIVLVVCPLIALMENQVMALKEKGIAAEYLSSTQTTDAKNKIHEDLNSGKPSIRLLYVTPEMIVTPGFMSKLTKIYARGLLSLIAIDEAHCISTWGHDFRPSYRKLSSLRSHVSDVPILALTATAAPKVQKDVVESLQLHNPLILKSSFNRANIYYEVRYKDLLDDTYADLSNMLKSKGNVCAIVYCLERSTCDDLSAYLSQTGISCSAYHAGLNNKVRTSVLDDWISSKIQLLSYWCSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRKRMEFILSNSGSNKSRPSSSQEESSKRSLTDFNQMVEYCEGSGCRRKKILESFGEQVNASLCGKTCDACRHPNLVTRYLEDLRTGCAFRQRNGSSRVFINSSTGAVDEEQLSEFWNRDEEANVSEEDISDSDDCNEAVTSLARSKSQSRLGINERIALLQRAEENFCRNENNDKQNNKVDKNAISDTIRGASRERFQNALKQALQRLEDLKIEVETSAYLLEDDCYKKYGKAGKSFYYSQVASTVRWLSTANSTDLINRLRVNDASPSMNALSEAEYTTITPSSADHCAKEAASNARSETSCALPIESASFNTKLPAIPSFSEFVNSKKAKGNQLNTSQKRSQDKSIKTAEKRMKL | 794 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva06g00510 | 794 | MobiDBLite | consensus disorder prediction | 446 | 467 | - | - | |
Bva06g00510 | 794 | SMART | ultradead3 | 106 | 308 | IPR014001 | - | |
Bva06g00510 | 794 | PANTHER | ATP-DEPENDENT DNA HELICASE Q-LIKE 3 | 72 | 776 | - | - | |
Bva06g00510 | 794 | TIGRFAM | recQ_fam: ATP-dependent DNA helicase, RecQ family | 100 | 510 | IPR004589 | GO:0004386|GO:0006310 | |
Bva06g00510 | 794 | Gene3D | - | 69 | 299 | IPR027417 | - | |
Bva06g00510 | 794 | SMART | helicmild6 | 343 | 424 | IPR001650 | - | |
Bva06g00510 | 794 | CDD | SF2_C_RecQ | 300 | 433 | - | - | |
Bva06g00510 | 794 | Pfam | DEAD/DEAH box helicase | 114 | 280 | IPR011545 | GO:0003676|GO:0005524 | |
Bva06g00510 | 794 | PANTHER | DNA HELICASE RECQ FAMILY MEMBER | 72 | 776 | - | - | |
Bva06g00510 | 794 | ProSiteProfiles | Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. | 118 | 292 | IPR014001 | - | |
Bva06g00510 | 794 | CDD | DEXHc_RecQ | 99 | 299 | - | - | |
Bva06g00510 | 794 | Pfam | RecQ zinc-binding | 437 | 508 | IPR032284 | - | |
Bva06g00510 | 794 | MobiDBLite | consensus disorder prediction | 767 | 781 | - | - | |
Bva06g00510 | 794 | ProSiteProfiles | Superfamilies 1 and 2 helicase C-terminal domain profile. | 312 | 464 | IPR001650 | - | |
Bva06g00510 | 794 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 150 | 444 | IPR027417 | - | |
Bva06g00510 | 794 | Pfam | Helicase conserved C-terminal domain | 319 | 422 | IPR001650 | - | |
Bva06g00510 | 794 | Coils | Coil | 631 | 651 | - | - | |
Bva06g00510 | 794 | Gene3D | - | 300 | 526 | IPR027417 | - | |
Bva06g00510 | 794 | MobiDBLite | consensus disorder prediction | 767 | 794 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva06g00510 | Bva-Chr6 | 5671536 | 5678351 | Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva06g00510 | 103 | 439 | Eukaryotic Initiation Factors Gene Family | AT3G19760 | 22.067 | 1.73e-08 | 55.8 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva06g00510 | - | K10901 | gmx:100819601 | 1061.98 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva06g00510 | 06 | 5671536 | 5678351 | Bva06g00510 | 06 | 5671536 | 5678351 | ECH |