Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00510 ATGAGGACCAGCTTCTTCAATGTAAGcatctataaaataaactgTGGGCTGTTCTATGGGATCATTGAGTACTACTATCCCACAAATGGCAAGACGTTTGCACAGCTAACTTTTCCAATTTCTGCACATTGCGATGCAGCACACGAAAACCTTGGATCAAAGCTCtgcattctcatttttctttctgtagcACGAATTGGAATTGAAATGCAGAAGTCGACTTTGCCACTGAAGAACGTGAAAAACGCGAATGAGAATAAGAAGAAGTTATTACACAGCAAGGAAGCATTGGTGAAGCTTTTAAGATGGCATTTTGGGTACCCTGAGTTTAGAGGCAAGCAATTGGATGCTATTCAAGCTGTACTCTCAGGCAGAGATTGTTTTTGTCTCATGCCAACTGGAGGAGGCAAGTCAATGTGTTATCAAATCCCTGCATTGGCTAAGACAGGAATTGTGCTTGTTGTTTGTCCTTTAATAGCGTTGATGGAAAACCAAGTGATGGCATTAAAGGAAAAAGGCATTGCTGCCGAATATCTCTCCTCAACACAAACAACAGATGCAAAAAATAAGATTCATGAGGACCTTAATTCTGGAAAGCCTTCTATAAGGCTGCTCTATGTGACTCCAGAAATGATAGTGACGCCAGGGTTTATGTCAAAGCTGACAAAGATTTATGCGAGGGGGTTATTGAGTCTGATTGCAATAGATGAGGCACATTGCATCTCAACTTGGGGCCATGATTTCAGACCTAGCTATCGTAAGCTTTCATCTCTGAGAAGCCATGTCTCAGACGTTCCAATATTGGCTCTGACTGCAACTGCTGCCCCTAAGGTTCAAAAGGATGTGGTAGAATCCTTGCAGCTGCACAAcccattaatattaaaatcttcttttaatcgtgctaatatatattatgaagTTCGGTACAAAGATCTTTTGGATGACACGTATGCTGATTTATCTAATATGCTCAAATCTAAGGGAAATGTCTGTGCTATAGTTTACTGCCTTGAACGTTCAACATGCGATGATTTGTCTGCTTATCTATCTCAAACTGGCATTTCCTGTTCTGCTTATCACGCTGGCTTGAATAATAAAGTTCGAACTTCTGTGTTAGATGATTGGATTTCTTCTAAGATACAATTACTGAGCTATTGGTGTTCATTCAGAATGGGCATTGATAGAAAGGATGTCAGAATTGTGTGCCATTTCAATATTCCAAAGTCAATGGAAGCATTCTATCAAGAGTCAGGAAGAGCTGGTCGTGATCAATTGCCCTCAACAAGTCTGTTATACTATGGAGTAGATGATCGTAAAAGAATGGAATTCATATTAAGCAATTCTGGAAGTAATAAATCAAGGCCGTCAAGCTCACAAGAAGAATCATCTAAAAGGTCCCTGACTGACTTCAATCAGATGGTTGAATATTGTGAAGGATCTGGATGCCGAAGGAAAAAGATTCTCGAGAGTTTTGGTGAACAGGTGAATGCATCACTATGCGGGAAAACATGTGATGCCTGCAGACATCCAAACTTAGTTACCAGATATTTGGAGGATCTCAGAACAGGATGTGCTTTTCGCCAGAGAAATGGCTCCTCTCGAGTTTTTATTAATAGCTCCACAGGTGCAGTTGATGAGGAGCAGTTATCTGAATTCTGGAATCGTGATGAGGAAGCAAATGTATCAGAGGAAGATATATCTGATTCTGATGATTGTAATGAGGCTGTCACCAGCCTTGCCAGGTCAAAGTCCCAATCCAGACTGGGAATAAATGAGAGGATTGCATTATTGCAGCGtgcagaagaaaatttttgtcgAAATGAAAACAATGACAAACAGAACAACAAAGTTGACAAGAATGCTATATCTGATACAATCCGAGGAGCAAGCAGGGAAAGATTTCAAAATGCTCTAAAGCAGGCTCTGCAACGGCTTGAAGACTTAAAAATTGAAGTGGAAACATCAGCATATTTGCTTGAAGATGATTGctataaaaaatatggaaaGGCTGGGAAGTCATTCTATTATTCACAAGTGGCAAGTACTGTAAGGTGGCTGTCAACTGCAAATTCTACTGATCTGATAAATCGACTTAGAGTTAATGATGCTTCCCCATCAATGAATGCCTTGTCTGAAGCTGAATACACAACTATAACACCCTCTTCGGCAGATCATTGTGCAAAGGAAGCCGCTAGCAATGCTAGATCAGAAACGTCATGTGCTTTGCCTATTGAAAGTGCTTCCTTTAATACAAAGTTGCCAGCAATTCCATCTTTCTCTGAGTTTGTCAATAGTAAGAAGGCAAAGGGCAACCAACTAAACACCTCACAGAAGCGCTCACAAGACAAGTCCATAAAGACCGCCGAGAAGAGGATGAAGTTATA 2384 0.3888 MRTSFFNVSIYKINCGLFYGIIEYYYPTNGKTFAQLTFPISAHCDAAHENLGSKLCILIFLSVARIGIEMQKSTLPLKNVKNANENKKKLLHSKEALVKLLRWHFGYPEFRGKQLDAIQAVLSGRDCFCLMPTGGGKSMCYQIPALAKTGIVLVVCPLIALMENQVMALKEKGIAAEYLSSTQTTDAKNKIHEDLNSGKPSIRLLYVTPEMIVTPGFMSKLTKIYARGLLSLIAIDEAHCISTWGHDFRPSYRKLSSLRSHVSDVPILALTATAAPKVQKDVVESLQLHNPLILKSSFNRANIYYEVRYKDLLDDTYADLSNMLKSKGNVCAIVYCLERSTCDDLSAYLSQTGISCSAYHAGLNNKVRTSVLDDWISSKIQLLSYWCSFRMGIDRKDVRIVCHFNIPKSMEAFYQESGRAGRDQLPSTSLLYYGVDDRKRMEFILSNSGSNKSRPSSSQEESSKRSLTDFNQMVEYCEGSGCRRKKILESFGEQVNASLCGKTCDACRHPNLVTRYLEDLRTGCAFRQRNGSSRVFINSSTGAVDEEQLSEFWNRDEEANVSEEDISDSDDCNEAVTSLARSKSQSRLGINERIALLQRAEENFCRNENNDKQNNKVDKNAISDTIRGASRERFQNALKQALQRLEDLKIEVETSAYLLEDDCYKKYGKAGKSFYYSQVASTVRWLSTANSTDLINRLRVNDASPSMNALSEAEYTTITPSSADHCAKEAASNARSETSCALPIESASFNTKLPAIPSFSEFVNSKKAKGNQLNTSQKRSQDKSIKTAEKRMKL 794
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00510 794 MobiDBLite consensus disorder prediction 446 467 - -
Bva06g00510 794 SMART ultradead3 106 308 IPR014001 -
Bva06g00510 794 PANTHER ATP-DEPENDENT DNA HELICASE Q-LIKE 3 72 776 - -
Bva06g00510 794 TIGRFAM recQ_fam: ATP-dependent DNA helicase, RecQ family 100 510 IPR004589 GO:0004386|GO:0006310
Bva06g00510 794 Gene3D - 69 299 IPR027417 -
Bva06g00510 794 SMART helicmild6 343 424 IPR001650 -
Bva06g00510 794 CDD SF2_C_RecQ 300 433 - -
Bva06g00510 794 Pfam DEAD/DEAH box helicase 114 280 IPR011545 GO:0003676|GO:0005524
Bva06g00510 794 PANTHER DNA HELICASE RECQ FAMILY MEMBER 72 776 - -
Bva06g00510 794 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 118 292 IPR014001 -
Bva06g00510 794 CDD DEXHc_RecQ 99 299 - -
Bva06g00510 794 Pfam RecQ zinc-binding 437 508 IPR032284 -
Bva06g00510 794 MobiDBLite consensus disorder prediction 767 781 - -
Bva06g00510 794 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 312 464 IPR001650 -
Bva06g00510 794 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 444 IPR027417 -
Bva06g00510 794 Pfam Helicase conserved C-terminal domain 319 422 IPR001650 -
Bva06g00510 794 Coils Coil 631 651 - -
Bva06g00510 794 Gene3D - 300 526 IPR027417 -
Bva06g00510 794 MobiDBLite consensus disorder prediction 767 794 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Bva06g00510 Bva-Chr6 5671536 5678351 Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00510 103 439 Eukaryotic Initiation Factors Gene Family AT3G19760 22.067 1.73e-08 55.8
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00510 - K10901 gmx:100819601 1061.98
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00510 06 5671536 5678351 Bva06g00510 06 5671536 5678351 ECH