Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00500 ATGGCCGCTGTTCGCTCCCTTCTCTtacctctcttcttcttcttcttcttcgcactttctttttcccctacTTCTTTATCCATTCCAGAGAATGAGGCCCTTCTCAAGCTAAAACAATCTTTCACCAACACAGCTTCTTTATCTTCTTGGGTTCCAAACTCATCTCCTTGCGCAGACAAGTGGGCAGGAGTCATCTGTTCCAACAACATCATCACGAATCTTCACTTCACCAGCTTTGGTCTCTCTGGGAAGATCGACGTTGAAGCTCTCATGGAAATACGTGGAATTCGAAGTCTCAGCTTCGTCAATAACAACTTCTCAGGTCCAATGCCAGAGTTAAACAAGCTCGCCGGTTTGAAGACTCTGTTATTAACGGCAAATCAATTCTCTGGGCCCATTGCTGCAGATTTCTTCTCCACTTTTAACTCGTTGAGAAAAGTCTGGATTTCAAGCAACAAATTCTCGGGAAATTTACCTGAAAGCTTGAAAAATCTAGAGTCTCTGATAGAATTGCACGTAGAGAACAACGAATTCTCAGGACGCATTCCAGATTTGAAGCAAGATCTTAAATCAGTGGATTTTTCCAATAACAAATTCGAAGGCCAAATCCCAGAGAGCTTGGCTAAGTATGGGAATTCGTTTGCAGGAAACGAAGGACTTTGTGGGAAACCATTGGAAAAGCCTTGTACACCACCGCAACCTGAGAAGCAGGAAAGCAGTAATTTGGTCATGAAAGTGTTTATAGTGGTCATTATTTTCTCTGTTGTGGTGGTGATTTTACTATTGATGAGATCATCAAAGCGTCGAGATGATGACTTGGGTGTGACTGAGAGACAAAGAGGGAACAACGAGGTGGTTCAAGTGCACGTGCCTGGCTCTGGCTCAGGCTCAACCCACAGTAGGCGTTCGGAAACGAGCAGAAAGAGTGGCGATTCCAAGAGGGGTTCGGCGAGGATGGGTGACCTTCTGATGGTGAATGACGAAAAGGGTGTGTTTGGGTTGCCCGATTTGATGAAGGCTGCTGCAGAGGTTTTAGGAAATGGTGGAATTGGTTCGGCCTATAAAGCTGCCATGACCAATGGCTTGTCCGTGGTGGTCAAGAGAATGAGGGAGATGAATGCGTATAGCAAAGATTTATTTGATGCTGAGATTAGAAAATTTGGAAGAATCAGACACACCAATATCTTGACGCCTTTGGCCTACCATTACCGCAGAGAAGAGAAGCTACTTGTCTCTGAGTATATTCCCAAAGGCAGCTTGTTATACGTCTTGCATGGTGATAGAGGAAACTCTCATGCTGAGCTGAACTGGGCTACACGGCTCAAGATTGTGCAGGGAATTGCGCGAGGATTGGGTTTCCTTCATTCTCAATTTGATTCCTACGACCTGCCACACGGGAACCTTAAATCATGTAATATTCTGCTGGGTGACAATTATGAGCCACTTCTAAATGACTATGCTTTTCATCCACTGATGAACCCCGACTCCGCTGTACAGTCATTGTTTGCCTATAAGACTCCAGATTACACACAATACCAGCAAGTTTCACGCAAAACTGATGTCTACTGTCTCGGAATTATCATCCTTGAAATCATGACTGGAAAATTCCCTTCTCAGTATCATAGCAATGGCAAGGGTGGGACTGATGTTGTGCAATGGGTGTTCACAGAGATTTCTGAGAGAAGAGAGGCAGAAGTGATTGATCCAGAGATAGCAACTAATGCAGGTTCTTCACTGAATCAAATGCTGCAACTTCTCCAAATAGGAGCTGCTTGCACTGAGAGCAATCCCGAACAACGAATTGACTTGAAGGAAGCCATTAGAAGGATAGAGGAGGTAAAGGTCTA 1847 0.4348 MAAVRSLLLPLFFFFFFALSFSPTSLSIPENEALLKLKQSFTNTASLSSWVPNSSPCADKWAGVICSNNIITNLHFTSFGLSGKIDVEALMEIRGIRSLSFVNNNFSGPMPELNKLAGLKTLLLTANQFSGPIAADFFSTFNSLRKVWISSNKFSGNLPESLKNLESLIELHVENNEFSGRIPDLKQDLKSVDFSNNKFEGQIPESLAKYGNSFAGNEGLCGKPLEKPCTPPQPEKQESSNLVMKVFIVVIIFSVVVVILLLMRSSKRRDDDLGVTERQRGNNEVVQVHVPGSGSGSTHSRRSETSRKSGDSKRGSARMGDLLMVNDEKGVFGLPDLMKAAAEVLGNGGIGSAYKAAMTNGLSVVVKRMREMNAYSKDLFDAEIRKFGRIRHTNILTPLAYHYRREEKLLVSEYIPKGSLLYVLHGDRGNSHAELNWATRLKIVQGIARGLGFLHSQFDSYDLPHGNLKSCNILLGDNYEPLLNDYAFHPLMNPDSAVQSLFAYKTPDYTQYQQVSRKTDVYCLGIIILEIMTGKFPSQYHSNGKGGTDVVQWVFTEISERREAEVIDPEIATNAGSSLNQMLQLLQIGAACTESNPEQRIDLKEAIRRIEEVKV 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00500 615 MobiDBLite consensus disorder prediction 280 300 - -
Bva06g00500 615 Pfam Leucine rich repeat N-terminal domain 30 67 IPR013210 -
Bva06g00500 615 Gene3D Transferase(Phosphotransferase) domain 1 415 614 - -
Bva06g00500 615 Pfam Protein kinase domain 343 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00500 615 SUPERFAMILY L domain-like 29 212 - -
Bva06g00500 615 Gene3D Ribonuclease Inhibitor 138 231 IPR032675 -
Bva06g00500 615 PANTHER LRR RECEPTOR-LIKE KINASE 5 615 - -
Bva06g00500 615 ProSiteProfiles Protein kinase domain profile. 339 613 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00500 615 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 615 - -
Bva06g00500 615 MobiDBLite consensus disorder prediction 301 315 - -
Bva06g00500 615 Gene3D Ribonuclease Inhibitor 29 137 IPR032675 -
Bva06g00500 615 SUPERFAMILY Protein kinase-like (PK-like) 343 610 IPR011009 -
Bva06g00500 615 Gene3D Phosphorylase Kinase; domain 1 338 414 - -
Bva06g00500 615 MobiDBLite consensus disorder prediction 270 319 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00500 Bva-Chr6 5629836 5632556 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00500 14 615 Receptor kinase-like Gene Family AT3G42880 50.715 0.0 624
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Bva06g00500 Pkinase 2.7e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00500 - - gmx:100816925 781.556
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01138 05 5855156 5857609 Bva06g00500 06 5629836 5632556 BWGD
Bva06g00500 06 5629836 5632556 Bva06g00500 06 5629836 5632556 ECH