Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00499 ATGTCTACCTCGTCGGAGTATTCGGAGTTTTCTTCCCAGAAGCCGACCAAACTGTCGGAGAAGTCGACTTTCTCTCAGACTTGTAGCTTATTGAGTCAGTATCTCAAGGAGAAGGGTTCCTTTGGAGATCTAACTCTTGGGATGACATGCAACATCGAAGGAACTGGTTCACCCGAGACAACTTGTCAGTCTACAACAACCATGAACTTGTTTCCTACCAAGGAAAACAACATAGCACCACAGCACCTAACAGCAGCCATGAATTCACTCCATCCACATGGTCCTTATCGCCCCCATCTCTCTTCTGAAGAGATTCCAAACATAGTAAATTCCAGTAAGGAGTCTAAAGCTGCGCAATTGACAATCTTCTATGCTGGACAAGTTTTTGTGGTTGATGATTTTCCGGCCGAGAAAGCCAAAGAGATCATGTCCATTGCCAGCTCCCAAACCCAAAATGCCTCTGCTTACACTTTCACTAAGAACCAGCCTTGTTTTCCTGCTAATTTGGGCAAAATCACCGTGGATTCCACCATTCAAGACCGGCCTCAAACGCCATCCAGACCTGTCGTTTgtgGTCTACCAATTGAAAGGAAAGCTTCACTTCACCGGTTcttggagaagagaaaagatagAATTGCTGCCAAAGCACCATACCAAACATGCCCTAACAGATCAGCCGAATCAAAGTCGCCATCGTGGCTGGGCTTGGCTTCTCAATCACCACAGATCTG 731 0.4487 MSTSSEYSEFSSQKPTKLSEKSTFSQTCSLLSQYLKEKGSFGDLTLGMTCNIEGTGSPETTCQSTTTMNLFPTKENNIAPQHLTAAMNSLHPHGPYRPHLSSEEIPNIVNSSKESKAAQLTIFYAGQVFVVDDFPAEKAKEIMSIASSQTQNASAYTFTKNQPCFPANLGKITVDSTIQDRPQTPSRPVVCGLPIERKASLHRFLEKRKDRIAAKAPYQTCPNRSAESKSPSWLGLASQSPQI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00499 243 Pfam Jas motif 194 219 IPR018467 -
Bva06g00499 243 Pfam tify domain 115 147 IPR010399 -
Bva06g00499 243 MobiDBLite consensus disorder prediction 221 243 - -
Bva06g00499 243 SMART tify_2 113 148 IPR010399 -
Bva06g00499 243 ProSiteProfiles Tify domain profile. 113 148 IPR010399 -
Bva06g00499 243 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 14 228 IPR040390 -
Bva06g00499 243 MobiDBLite consensus disorder prediction 216 243 - -
Bva06g00499 243 PANTHER PROTEIN TIFY 10A-LIKE 14 228 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00499 Bva-Chr6 5622023 5624234 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00499 1 239 Tify Gene Family AT1G19180 43.023 1.54e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Bva06g00499 tify 1.9e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00499 K13464 - gmx:100801449 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01142 05 5876111 5878424 Bva06g00499 06 5622023 5624234 BWGD
Bva06g00499 06 5622023 5624234 Bva06g00499 06 5622023 5624234 ECH