Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00495 ATGGTGAAACAGACAATGGTAGAGCCCGCCGAGAGAAGCGATTCCAAGTACAAGGGGGTCCGGAAGAGAAACTGGGGCAAATGGGTATCCGAAATTAGACTGCCCAACAGTAGGGAGAGGATTTGGTTGGGATCTTATGACTCCGCGGAGAAGGCGGCGCGTGCATTCGACGCTGCCATGTTTTGCTTGCGTGGCCGTTCCGCTAAGTTTAATTTCCCCGATACCCCACCTGACATTGCCGGAGGTAGGTCTTTAACCCCTTCTCAAATTCAGATTGCCGCAGCCCGATACGCAAATTCGGAGCCCCATATAAACCAGTCTGGTGGCTCCGTTACAAGTGAGTCGCCACCGGAGGAATCTTATTCTGCTTCTATTTCGAATGTGACGATGTTTCCTATGGAATCCCCATCTCATTCCCTCTCCGAGGGTACGGTCCAAACGGATAGCGACGTCCCCCTAAACGGGCCGTTTTCGAATTTGTTTACATCAAATTCAACGGAGTCGGGTAATTACGCAACCGAATATGGGATTTTCCCGGGTTTTGATGATTTGAGCAGTGATTACTACACACCGACAATGCCAACGGTTGATTACggagaagaaaacatggaaggGTTGATAGTTCAAGACTCATTTCTGTGGAATTTCTA 650 0.4785 MVKQTMVEPAERSDSKYKGVRKRNWGKWVSEIRLPNSRERIWLGSYDSAEKAARAFDAAMFCLRGRSAKFNFPDTPPDIAGGRSLTPSQIQIAAARYANSEPHINQSGGSVTSESPPEESYSASISNVTMFPMESPSHSLSEGTVQTDSDVPLNGPFSNLFTSNSTESGNYATEYGIFPGFDDLSSDYYTPTMPTVDYGEENMEGLIVQDSFLWNF 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00495 216 Gene3D AP2/ERF domain 15 74 IPR036955 GO:0003700|GO:0006355
Bva06g00495 216 ProSiteProfiles AP2/ERF domain profile. 16 73 IPR001471 GO:0003700|GO:0006355
Bva06g00495 216 MobiDBLite consensus disorder prediction 101 123 - -
Bva06g00495 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF017-LIKE 7 216 - -
Bva06g00495 216 Pfam AP2 domain 15 65 IPR001471 GO:0003700|GO:0006355
Bva06g00495 216 PRINTS Ethylene responsive element binding protein signature 39 55 IPR001471 GO:0003700|GO:0006355
Bva06g00495 216 PRINTS Ethylene responsive element binding protein signature 17 28 IPR001471 GO:0003700|GO:0006355
Bva06g00495 216 CDD AP2 15 75 IPR001471 GO:0003700|GO:0006355
Bva06g00495 216 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 216 - -
Bva06g00495 216 SUPERFAMILY DNA-binding domain 15 74 IPR016177 GO:0003677
Bva06g00495 216 SMART rav1_2 16 79 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00495 Bva-Chr6 5603817 5604826 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00495 15 216 AP2-EREBP Transcription Factor Family AT1G19210 51.691 1.19e-56 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Bva06g00495 AP2 1.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00495 - - gmx:732656 275.404
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g00495 06 5603817 5604826 Bva06g00495 06 5603817 5604826 ECH