Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00493 ATGAAGGCTCCATCAAATGGTTACTTGCCTAATTCTGGCGAAGGAGAAAGGAAGGCCATAAATTCAGAGTTATGGCATGCATGTGCTGGACCATTAGTTTCTTTGCCTCCTGTTGGAAGTCTGGTGGTTTACTTTCCTCAAGGACACAGTGAGCAAGTTGCAGCGTCCATGCAAAAGGAGGCTGATTTTGTACCTAGTTACCCTAACCTACCGTCCAAGTTGATTTGCATGCTTCACAATGTCGCATTGCATGCGGATCCTGAGACTGATGAGGTTTATGCACAGATGACCCTTCAACCTGTAAACAAATATGAAAAGGAAGCAATACTTGCATCAGACATGGGTCTCAAGCAAAACAGACAGCCTACTGAGTTCTTCTGCAAAACTCTCACAGCTAGTGACACAAGCACTCACGGTGGATTTTCTGTACCTCGTCGAGCAGCTGAGAAGATATTCCCACCTCTGGATTTTTCAATGCAACCCCCCGCTCAGGAGATAGTTGCCAAAGATTTGCACGACAGTACCTGGACATTCAGGCATATTTACCGCGGTCAACCAAAGAGGCATTTACTGACTACTGGTTGGAGTGTCTTTGTTAGCACAAAAAGACTCTTTGCTGGAGATTCTGTTCTTTTTATTAGGGACGAAAAACAGCAACTTCTATTGGGTATAAGGCATGCTAATAGACAGCAGCCAGCTCTCTCTTCATCAGTCATATCCAGTGACAGCATGCATATTGGCATTCTTGCCGCTGCAGCTCATGCTGCTGCAAATAATAGTCCCTTCACTATATTTTACAATCCAAGGGCCAGCCCCTCAGAATTTGTTATTCCATTAGCCAAGTATAACAAGGCAATGTACACTCAAGTTTCACTTGGAATGAGATTTAGGATGATGTTTGAGACTGAGGAGTCAGGAGTACGCAGATACATGGGAACAATCACAGGTATAAGTGACTTGGATACTGTGAGATGGAAAAATTCACAGTGGCGCAATCTTCAGGTCGGATGGGATGAATCCACTGCTGGTGATCGCCCAAGCAGAGTTTCAACTTGGGAAATTGAACCAGTAGTGACTCCTTTTTACATTTGTCCACCCCCATTTTTCCGGCCCAGGCTCCCCAAGCAACCAGGAATGCCAGATGATGAGTCTGATATAGAAAATGCTTTCAAGAGAGCTATGCCATGGCTTGGAGATGAGTTTGGCTTGAAGGATGCCTCAAGTTCAATATTTCCTGGTTTGAGTTTAGTGCAGTGGATGAGCATGCAgcagaataatcaattttctactGCTCAACCAGGATTTTTCCCAAACATGCTTTCATCTAATTCTTTGCATAATAACCTTGGCACTGATGATCCGTCCAAGTTATTGAGTTTTCAAGCCCCTGCCCTCTCTTCCCCAAatcttcaatttaataaacCTAGTTTACAAAACCATGTCAACCAATTGCAACAGCCCCCTGCATCATGGCCTCAGCAGCAGCAGCTGCAGTCACTGATGCAAACGCCAATAAACCAGCTCCAACAACAGAGGCAGCCACAACAACAGCAACTGCCTGAACCACAGAACCTGCCACAGCAGCAGCAACTACAGCAACAACAGCCCCAGCTGCATCAACAACGAGCACAGCAGCCACAGCAACAGCAACAATCATGTCAACCAGCAATTCTAAATAATGGGGTAGTTACTTCTAGCCAGATTCCAAGTCAGAGTGTACAGCAACCAGTAACCTACTCTCAGCTTCAGCAACAGCAATTACTGTCAGGCAGTATTCCAACTCAGCAAAGTATTCAGTCAGCTAGTAAGAATGCATTTCCAGTGACGTCCCTACCACAAGATTCACAATTTCAGCAGCAGATGGACCAGCAAGCTAGTCTCTTACAGAGGCAGCAACAGCAGACACAGTTGCAACAATCCCAATTGCAGTTATTGCAACAGAGCCTGTCACAGAGGGCACCACAGCAACCACAAGTAACTCAACTGTCACAGCAAAATCTCTCAGAGCAACAACTGCAGTTACAGTTATTACAGAAATTGCAGCAGCAtcaacaacagcagcagcaacttCTTTCCCCAACAAGCCCAATTTTGCAGCCTCAGCCGCTTCAGCAACAAAATGCTCACCAACAAAACCAGCAACTACCACAGCTACCTCTATCTCAGCATCAACCTCAACAGCTTAGCAACAATACATTCTCAACAGAGAAGCTTCTCAACAGCACCAGCTTCTCTTCAGCTGTGATGCAACCCCAACAGCTTCCCTTGAACCAACCCCAGAACACACAGAAACCACTCACAACTACCAGAGCTCCTTCTGCTCTTACAGAGGGAGATGCTCCATCATGCTCAACTTCACCATCAACAAATAATTGCCAGATATCTCCACCAAATCTCCTGAAGAGAAATCAGCAACTACCAGCCACATTAGGGGGGAGCATGGTGGTTGAGCCTACAAGCAATCTGGTTCAGGAACTTCAGAGCAAGTCTGACATCCAGATCAAACATGAGTTTCCTGGTGTAAAAGGACCTGgccaacaaaaatataaagggGCAATCACTGATCAGCTGGAAGCTTCCTCTTCTGGAACATCTTATTGTCTTGATCCCGGTAATGTCACGCAGAACTTCCAACTTCCCAACTTCTGCATCGATGGGGATATCCAATCACACCCCAGGAACAGTGTACCATTTGCCTCTAATCTTGATGGACTAGCGCCTGATACTTTACTCTCAAGAGGCTATGACTCACAGAAAGACCTTCAAAACTTGCTCTCTAATTATGGTGGTGCTCCAAGAGATATCGAGACCGAACTGTCCACTGCTGCCATCAGCTCACAGTCATTTGTAGTGCCAAATATACCTTTTAAGCCTGGTTGTTCAAGCGATGTTGCCATCACAGACACGGGGGTTTTAAATAATGGTTTGTGGACAAACCAGACCCAACGAATGCGAACATATACTAAGGTCCAAAAGCGTGGCTCTGTAGGAAGATGTATTGATGTCACCCGTTACAAGGGTTATGATGAACTTCGACATGATTTGGCCCGTATGTTCGGAATTGAAGGTCAACTAGAAGATCCTCAAAGGACTGACTGGAAACTCGTATACGTTGATCATGAAAATGATATTCTTCTTGTTGGTGATGATCCTTGGGAAGAGTTTGTGAGCTGTGTCCAGAGCATAAAGATATTGTCATCTGCTGAAGTGCAGCAAATGAGCTTGGATGGGGATTTAGGTAATGTCCCAATTCCCAATCAAGCTTGCAGTGGGACAGACAGTGGTAATGCATGGAGGGGACAGTATGACGATAACTCTGCTGCCTCATTTAATCGGTTGGATATGTG 3347 0.4446 MKAPSNGYLPNSGEGERKAINSELWHACAGPLVSLPPVGSLVVYFPQGHSEQVAASMQKEADFVPSYPNLPSKLICMLHNVALHADPETDEVYAQMTLQPVNKYEKEAILASDMGLKQNRQPTEFFCKTLTASDTSTHGGFSVPRRAAEKIFPPLDFSMQPPAQEIVAKDLHDSTWTFRHIYRGQPKRHLLTTGWSVFVSTKRLFAGDSVLFIRDEKQQLLLGIRHANRQQPALSSSVISSDSMHIGILAAAAHAAANNSPFTIFYNPRASPSEFVIPLAKYNKAMYTQVSLGMRFRMMFETEESGVRRYMGTITGISDLDTVRWKNSQWRNLQVGWDESTAGDRPSRVSTWEIEPVVTPFYICPPPFFRPRLPKQPGMPDDESDIENAFKRAMPWLGDEFGLKDASSSIFPGLSLVQWMSMQQNNQFSTAQPGFFPNMLSSNSLHNNLGTDDPSKLLSFQAPALSSPNLQFNKPSLQNHVNQLQQPPASWPQQQQLQSLMQTPINQLQQQRQPQQQQLPEPQNLPQQQQLQQQQPQLHQQRAQQPQQQQQSCQPAILNNGVVTSSQIPSQSVQQPVTYSQLQQQQLLSGSIPTQQSIQSASKNAFPVTSLPQDSQFQQQMDQQASLLQRQQQQTQLQQSQLQLLQQSLSQRAPQQPQVTQLSQQNLSEQQLQLQLLQKLQQHQQQQQQLLSPTSPILQPQPLQQQNAHQQNQQLPQLPLSQHQPQQLSNNTFSTEKLLNSTSFSSAVMQPQQLPLNQPQNTQKPLTTTRAPSALTEGDAPSCSTSPSTNNCQISPPNLLKRNQQLPATLGGSMVVEPTSNLVQELQSKSDIQIKHEFPGVKGPGQQKYKGAITDQLEASSSGTSYCLDPGNVTQNFQLPNFCIDGDIQSHPRNSVPFASNLDGLAPDTLLSRGYDSQKDLQNLLSNYGGAPRDIETELSTAAISSQSFVVPNIPFKPGCSSDVAITDTGVLNNGLWTNQTQRMRTYTKVQKRGSVGRCIDVTRYKGYDELRHDLARMFGIEGQLEDPQRTDWKLVYVDHENDILLVGDDPWEEFVSCVQSIKILSSAEVQQMSLDGDLGNVPIPNQACSGTDSGNAWRGQYDDNSAASFNRLDM 1115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00493 1115 Coils Coil 628 648 - -
Bva06g00493 1115 CDD B3_DNA 125 217 IPR003340 GO:0003677
Bva06g00493 1115 Pfam AUX/IAA family 982 1071 IPR033389 -
Bva06g00493 1115 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 1100 IPR044835 GO:0003677|GO:0006355|GO:0009725
Bva06g00493 1115 PANTHER AUXIN RESPONSE FACTOR 19 1 1100 - -
Bva06g00493 1115 Gene3D - 980 1074 - -
Bva06g00493 1115 SUPERFAMILY DNA-binding pseudobarrel domain 116 255 IPR015300 -
Bva06g00493 1115 MobiDBLite consensus disorder prediction 755 798 - -
Bva06g00493 1115 SMART B3_2 126 228 IPR003340 GO:0003677
Bva06g00493 1115 ProSiteProfiles B3 DNA-binding domain profile. 126 228 IPR003340 GO:0003677
Bva06g00493 1115 MobiDBLite consensus disorder prediction 506 553 - -
Bva06g00493 1115 Pfam B3 DNA binding domain 126 227 IPR003340 GO:0003677
Bva06g00493 1115 Gene3D - 123 227 IPR015300 -
Bva06g00493 1115 ProSiteProfiles PB1 domain profile. 985 1078 IPR000270 GO:0005515
Bva06g00493 1115 MobiDBLite consensus disorder prediction 598 624 - -
Bva06g00493 1115 Pfam Auxin response factor 252 334 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Bva06g00493 1115 SUPERFAMILY CAD & PB1 domains 998 1063 - -
Bva06g00493 1115 Gene3D - 289 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00493 Bva-Chr6 5588463 5596160 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00493 1 489 B3 DNA Binding Superfamily AT1G19220 83.469 0.0 847
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Bva06g00493 AUX_IAA 2.5e-09 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00493 K14486 - zju:107406859 1380.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva05g01147 05 5897192 5905587 Bva06g00493 06 5588463 5596160 BWGD
Bva06g00493 06 5588463 5596160 Bva06g00493 06 5588463 5596160 ECH