Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva06g00490 ATGGAAGCCAAGTTCGCAGCTTTGCAATTTGTTCTCCTTCTGGTTGCTTTACTTGCTGTCCATGTACGCCCCTCCCATGTGacACTTAATGAGACTTGTGATGACTTTGTTGGTTCTCAGAATAGAGACACTGGAgCACCATGCCCATTCGGTTGGGTTATTTGCCCTAATAAAACCAAGTGCTATCGCCATGTTGGGATACCTCAATCTTGGAATGAGTCAGAGGCCTGTTGTAGTAAATATGGTGGACATTTAGCGGCATTGTTATCCCTGCAGGAACTATCCTTTGCTCAGAGTCTATGTAATGTTACAGCTAATAGTTGCTGGGTTGGAGGAAGAAGACTCAACTCTACGGCCAGTCATGGGTGGACATGGTCTGACAATTCTCAGTGGAATGAGTCCATGTTTCCTTTGGCATCTGTTCAATCCAGTTGTTCTGGACTATCCTGCCACATGAACAACTCTGAACAATgtgcaataattaataattcaagaTCTGTCATGAGTGACAGATGCGACAATTCTCATGCCTCTATATGTGTTCTTGATATAGGCAAGAGATGCTACCACTTGCATTGTCACAGGGAATACTTTATCATCCTTGCAGTGGTGAGTGCATTAATCCTCTGCACAACATTAGTAGTAGTGGTTTGGCTTCTTGTATATAAGCGGAGCAAGAAGAGAAGACGGTCTAGAAAACTATCTAATTCAGCAGCGTCTCAGTTAGTTCCTCCATTATGGAAAGTCTTTACTAAAGAGGAATTGAGGTTGATTACGAAGAACTTCAGTGAAGGTAACCGTCTTGTTGGTGACGCCAAGACTGGTGGTACATACAGTGGGGTTTTGTCTGATGGCTCAAAGGTGGCAGTTAAGAGATTAAAGAGGACAAGTTTtcagaggaaaaaagaattctaTTCTGAAATTGGTAGGGTTGCCAGGCTTCGGCATCCAAATCTGGTGGCTGTGAAGGGATGCTGCTATGATCATGGTGATCGCTACATTGTTTATGAGTTTGTAGTGAATGGGCCCTTAGATAAATGGCTTTACCACATTCCAAGGGGAGGTCGTAGCTTGGATTGGGCCATGAGGATGAAAATTGCCACCACACTTGCTCAAGGAATAGCGTTTCTACATGACAAGGTTAAGCCATATGTTGTGCACCGGGATATACGTGCTAGTAATGTACTTCTGGATGAGGAATTTGGAGCCCATCTCATGGGCGTTGGTCTAGCCAAGTTTGTGCCATATGAAGTGATGCTTGAGAGGACAGTGATGGCTGGAGGAACTCATGGATATCTTGCTCCAGAATTTGTGTATAGAAATGAGATCACAACAAAGAGTGATGTTTATAGCTTCGGTGTCCTTTTACTCGAAATAGTCAGTGGACGTAGACCTGCACAGGCAGTTGATTCAGTGGGTTGGCAGAGCATATTCGAATGGGCCACACCTCTTGTGCAAGCTCATCGTTATCATGAACTCTTGGATCCTTATatatcttcatcatcatcttctaaTATCCCAGAGGCCACTACCATCCAGAAGGTTGTTGACCTGGTCTATTCTTGCACTCAGCATGTTCCTTCGATGCGCCCTAGAATGTCTCATGTTGTTCATCAGTTGCAACAGTTTGCTCAGCCACTGGTTAAGTA 1649 0.4275 MEAKFAALQFVLLLVALLAVHVRPSHVTLNETCDDFVGSQNRDTGAPCPFGWVICPNKTKCYRHVGIPQSWNESEACCSKYGGHLAALLSLQELSFAQSLCNVTANSCWVGGRRLNSTASHGWTWSDNSQWNESMFPLASVQSSCSGLSCHMNNSEQCAIINNSRSVMSDRCDNSHASICVLDIGKRCYHLHCHREYFIILAVVSALILCTTLVVVVWLLVYKRSKKRRRSRKLSNSAASQLVPPLWKVFTKEELRLITKNFSEGNRLVGDAKTGGTYSGVLSDGSKVAVKRLKRTSFQRKKEFYSEIGRVARLRHPNLVAVKGCCYDHGDRYIVYEFVVNGPLDKWLYHIPRGGRSLDWAMRMKIATTLAQGIAFLHDKVKPYVVHRDIRASNVLLDEEFGAHLMGVGLAKFVPYEVMLERTVMAGGTHGYLAPEFVYRNEITTKSDVYSFGVLLLEIVSGRRPAQAVDSVGWQSIFEWATPLVQAHRYHELLDPYISSSSSSNIPEATTIQKVVDLVYSCTQHVPSMRPRMSHVVHQLQQFAQPLVK 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva06g00490 549 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 1 545 - -
Bva06g00490 549 Pfam Protein tyrosine and serine/threonine kinase 270 540 IPR001245 GO:0004672|GO:0006468
Bva06g00490 549 SMART CLECT_2 48 181 IPR001304 -
Bva06g00490 549 Gene3D Phosphorylase Kinase; domain 1 238 338 - -
Bva06g00490 549 Gene3D - 30 183 IPR016186 -
Bva06g00490 549 PANTHER - 1 545 - -
Bva06g00490 549 SMART tyrkin_6 275 540 IPR020635 GO:0004713|GO:0006468
Bva06g00490 549 Gene3D Transferase(Phosphotransferase) domain 1 339 545 - -
Bva06g00490 549 ProSitePatterns Tyrosine protein kinases specific active-site signature. 385 397 IPR008266 GO:0004672|GO:0006468
Bva06g00490 549 Pfam Lectin C-type domain 68 181 IPR001304 -
Bva06g00490 549 SUPERFAMILY C-type lectin-like 38 183 IPR016187 -
Bva06g00490 549 SUPERFAMILY Protein kinase-like (PK-like) 237 540 IPR011009 -
Bva06g00490 549 ProSiteProfiles Protein kinase domain profile. 263 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva06g00490 549 ProSiteProfiles C-type lectin domain profile. 57 181 IPR001304 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva06g00490 Bva-Chr6 5565825 5570089 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva06g00490 78 547 Receptor kinase-like Gene Family AT1G52310 69.647 0.0 650
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_C-LEC Bva06g00490 PK_Tyr_Ser-Thr 1.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva06g00490 - - vra:106762676 828.55